Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02411 ATGGGGCATAGTAGGTCTTTAGAGATTGAAACTGAGGACAACTTTGACTATCTAAAAAGATATCATTGGCTTCGTACTGCTGTTGTGGGAGCCAGAGAAGGGTTGCTCACAATGGGATCATTGATCATGGCTGTTGGAGATGTCAAGCAAGCCATTTTTAAGGTCGTGACCCTATCCGAGCTTGCAGGGTTGGTGGCAGGGACTTGTAGCAAGGAAAGGGGGCATAGTAGAGAGAGAGATGAGGGAGATACCAATGAAGAGAAAGAGAGTTTGCCAAACCATTTACAAGCAGCAGTAGCCTCTGCTTTAGCCTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAACTTCAGCGTCCTTTATAAGGGAATATAAGGTGGGACTTGGGGTGGTTGTGGCTGTTGTGAGCTTTGGTTTGGTGGTATTTGGTTGGTTGTGGGAAGTCTTGAGTAAGGCTCCAATGTGGAGGTCTGCTGTGGTGGTCTTGGTTGGGTCTTGGATGATCATGGCCATTACTTTTGGGCTAACCATGTTGTTGGTCAAGTGA 546 0.4689 MGHSRSLEIETEDNFDYLKRYHWLRTAVVGAREGLLTMGSLIMAVGDVKQAIFKVVTLSELAGLVAGTCSKERGHSRERDEGDTNEEKESLPNHLQAAVASALAFSVGAMVPLLATSASFIREYKVGLGVVVAVVSFGLVVFGWLWEVLSKAPMWRSAVVVLVGSWMIMAITFGLTMLLVK 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02411 181 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 10 179 IPR008217 GO:0005384|GO:0030026
Pumo6g02411 181 Pfam VIT family 84 176 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02411 Pumo-Chr6 48742670 48743282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02411 6 179 Nodulin-like Gene Family AT3G43660 48.387 3.40e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02411 K22736 - gmx:100807991 189.504