Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02407 ATGTTTTCGGTGTTGCGGTTTTGCAGAAAGTTTGTTCCTTTGTCAATTGTTCTCCTAATGCTACACTTGTTTTCCAAGCAACAGGAACATGAATACCTTGAAGAAGGAAAAGCACATAGAATCTCCTCTTGTGAGACTTCTCAATTGCTACGTTCTACTATTTGGGGAGCCACTGAGGGGTTGGTCTCAACAGCAACTATGATGATGATTTATGGAGCAGTCAGGCAAGACATTAAGGCCATGATCCAATCAGGACTTCTATGGTTGGTGGCACGGGCTTGTAGCATAGCCGCAATGAAGTTTGTGTCTGTGTCATTAGAGGTTGCTCAACTGAAGAGAGAGACGGAAAGGGGGCATACAAAGAGAGATGAGGGAGATATCAATGAAGAGAAAGAGAGTTTGCCAAACCATTTACAAGCAGCAGCAGCCACAGCTTTAGCCTTATCTGTTGGTGCAATGGTGCCATTGCTTGCAGCTTCAGCGTCCTTTATAAGGGAATATAAGGTGGGGCTTGGAGTGGTTTTGGCTGTTGTGAGCTTTGGTTTGGTGGTATTTGGTTGGTTATGGGTAGTCTTGAGTAAGGCTCTAGTGTGGAGATCTGCTGTGGTGGTCTTGGTTGGGTCTTGGATAATTATGGCCATTACTTTTGGGCTAACCATGTTGTTGGTCAAGTGA 675 0.4474 MFSVLRFCRKFVPLSIVLLMLHLFSKQQEHEYLEEGKAHRISSCETSQLLRSTIWGATEGLVSTATMMMIYGAVRQDIKAMIQSGLLWLVARACSIAAMKFVSVSLEVAQLKRETERGHTKRDEGDINEEKESLPNHLQAAAATALALSVGAMVPLLAASASFIREYKVGLGVVLAVVSFGLVVFGWLWVVLSKALVWRSAVVVLVGSWIIMAITFGLTMLLVK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02407 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 29 222 IPR008217 GO:0005384|GO:0030026
Pumo6g02407 224 Pfam VIT family 123 219 IPR008217 GO:0005384|GO:0030026
Pumo6g02407 224 Pfam VIT family 50 124 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02407 Pumo-Chr6 48455379 48457272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02407 33 222 Nodulin-like Gene Family AT3G43660 48.454 3.06e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02407 K22736 - gmx:100807991 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02407 6 48455379 48457272 Pumo3g01115 3 17950764 17951755 PCT