Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02405 ATGAAGAGAGAGAAGGAAATGGGGCATAGTAGAGAGATAGAAGAGGGAGATGCCAATGAAGAGAAACAAACTTTGCCAAACCCTTTACAAGCAGCAGCAACCTCAGCTTTAGCCTTTTCTGTTGGTGCAATGGTGCCATTGTTTGCAGTTGCAGCGTCCTTTATAGGGATTGGTTGGTTGTGGAGGTCTGCTGTGATGGTCTTGGTTAGGGTTTGGATGATCTTGGTCATTACTTTTGGGCTAACCATGATGTTGGGTCAAGTGCTCTTTGGTAGCTCCCTATATATTCTCTCTTTATGTATGATGATTGATATAGCTTGGAGATTTCCATTTGATATGGTGGGAGGAGATATTATCAGAGGGAAAGAGTGA 372 0.4301 MKREKEMGHSREIEEGDANEEKQTLPNPLQAAATSALAFSVGAMVPLFAVAASFIGIGWLWRSAVMVLVRVWMILVITFGLTMMLGQVLFGSSLYILSLCMMIDIAWRFPFDMVGGDIIRGKE 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02405 123 MobiDBLite consensus disorder prediction 1 21 - -
Pumo6g02405 123 MobiDBLite consensus disorder prediction 1 25 - -
Pumo6g02405 123 Pfam VIT family 15 72 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02405 Pumo-Chr6 48336223 48336831 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02405 14 87 Nodulin-like Gene Family AT3G43660 34.000 1.04e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02405 K22736 - gmx:100802179 83.9593