Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02399 ATGGAAGGGAATTTGTCACAAGGAGGTATGATTCGAGGTGGGGGTTCTTTTGGCAGTTTTGATTTGCCTGGATCAATGCGGGTTCATCGGCAAGGGAAACATCCTCATTCCATGAACATGCATCATACTCATCCTTGCCAAGGGTCTTCAATGCATTCCTCAGTTCATGATGGTTTTCTTCTTACAATGGGAACCTTGCAGAACTATGATCAGACAATGTCAATGATCGAGTTTAGTCAGGGAGATAGAAAAAAGAACTCACCAAGTGATGATAGTTTTGCTGAGGAAGGTGTTGATGGTCATCATGAAGCAGGTAAAGGGAAAAGGGGGTTGCCTTGGCAGCGGATGAAATGGACTGATAAGATGGTGAGGCTTCTGATAACGGTTGTGTCTTACATAGGCGAGGATGCAACTTCTGACAGTGGTTGTGAAAGAAGAAAATTTACTGTCCTACAGAAGAAGGGGAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAAAGAGGTTATCATGTTTCACCTCAACAATGTGAGGATAAATTCAATGACCTTAATAAAAGGTACAAAAAGCTTAATGATATGCTTGGCAGGGGAACTTCCTGCCAGGTTGTTGAAAATCCTTCTCTATTGGATTTGATCGATTATCTTTCCGAGAAAGAAAAGGATGAGGTTCGAAAAATATTGAGCTCCAAAAACTTGTTCTACGAAGAAATGTGTTCTTACCATAATGGTAATAGATTGCATTTACCCCATGATTCGACACTGCAACGATCATTGCAGTTGGCTCTCCGAAATAGAGATGATAATGACAATGATGATATCCGAAGGTCTTATCTCGATGATCATGAAGAAGACGATCTAGATGTGGAAACTGATGATCATGATGACTTTGAAGAGAATTATGCTTCCCATGCAGGTTGTAGAGGAGTCCATGGGGCAACAAGTCAACCTTTGAAGAGATTAAAACTAGGGCAAGGACAGGAAAATGTTGCTACTTTTGGGAGTGCTTTAAACTATCAACAACATAACAAAAGTTCTTACCCTCAGATGGTTCAATCTGATGTGAATCAAGCTTTACCTGAAAAAATGAGAGCATCTTGGTTACAAAAGCAATGGGTTGAATCTCGTTCACTTCAGTTAGAAGAGCAGAAGCTAAAGATTCAAGTCGAGATGTTGGAGCTGGATAAACAAAGATTGAAGTGGCAGGAGTTTAGTAAGAAAAAAGACCAGGAGTTGGAAAAGTTGAAGGTGGAGAATGAAAGAATGAAGCTTGAGAATCAACGTATGGCTTTAGAACTAAAGCGAAAAGAAATGGGCATTGGCTTTAACTAG 1329 0.4041 MEGNLSQGGMIRGGGSFGSFDLPGSMRVHRQGKHPHSMNMHHTHPCQGSSMHSSVHDGFLLTMGTLQNYDQTMSMIEFSQGDRKKNSPSDDSFAEEGVDGHHEAGKGKRGLPWQRMKWTDKMVRLLITVVSYIGEDATSDSGCERRKFTVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDLIDYLSEKEKDEVRKILSSKNLFYEEMCSYHNGNRLHLPHDSTLQRSLQLALRNRDDNDNDDIRRSYLDDHEEDDLDVETDDHDDFEENYASHAGCRGVHGATSQPLKRLKLGQGQENVATFGSALNYQQHNKSSYPQMVQSDVNQALPEKMRASWLQKQWVESRSLQLEEQKLKIQVEMLELDKQRLKWQEFSKKKDQELEKLKVENERMKLENQRMALELKRKEMGIGFN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02399 442 Coils Coil 374 401 - -
Pumo6g02399 442 Coils Coil 404 436 - -
Pumo6g02399 442 MobiDBLite consensus disorder prediction 83 109 - -
Pumo6g02399 442 MobiDBLite consensus disorder prediction 79 109 - -
Pumo6g02399 442 Gene3D - 118 189 - -
Pumo6g02399 442 PANTHER F16F4.11 PROTEIN-RELATED 1 439 - -
Pumo6g02399 442 MobiDBLite consensus disorder prediction 1 23 - -
Pumo6g02399 442 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02399 Pumo-Chr6 48093843 48095171 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo6g02399 Myb_DNA-bind_4 3.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02399 - - gmx:100816474 647.121