Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02398 ATGGAAGGGAATTTGTCACAAGGAGGTATGATTCGAGGTGGGGGTTCTTTTGGCAGTTTTGATTTGCCTGGATCAATGCGGGTTCATCGGCAAGGGAAACATCCTCATTCCATGAACCTGCATCATACTCATCCTTGCCAAGGGTCTTCAATGCATTCCTCAGTTCATGATGGTTATCTTCTTACAATGGGAACCTTGCAGAACTATGATAAGACAATGTCAATGATCGAGTTTAGTCAGGGAGATAGAAAAAAGAACTCACCAAGTGATGATAGTTTTGCTGAGGAAGGTGTTGATGGTCATCATGAAGCAGGTAAAGGGAAAAGGGGGTTGCCTTGGCAGCGGATGAAATGGACTGATAAGATGGTGAGGCTTCTGATAACGGTTGTGTCTTACATAGGCGAGGATGCAACTTCTGACAGTGGTTGTGAAAGAAGAAAATTTACTGTCCTACAGAAGAAGGGGAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAAAGAGGTTATCATGTTTCACCTCAACAATGTGAGGATAAATTCAATGACCTTAATAAAAGGTACAAAAAGCTTAATGATATGCTTGGCAGGGGAACTTCCTGCCAGGTTGTTGAAAATCCTTCTCTATTGGATTTGATCGATTATCTTTCCGAGAAAGAAAAGGATGAGGTTCGAAAAATATTGAGCTCCAAAAACTTGTTCTACGAAGAAATGTGTTCTTACCATAATGGTAATAGATTGCATTTACCCCATGATTCGACACTGCAACGATCATTGCAGTTGGCTCTCCGAAATATAGATGATAATGACAATGATGATATCCGAAGGTCCTATCTCGATGATCATGAAGAAGACGATCTAGACGTGGAAACTGATGATCATGATGACTTTGAAGAGAATTATGCTTCCCATGCAGGTTGTAGAGGAGTCCATGGGGCAACAAGTCAACCTTTGAAGAGATTAAAACTAGGGCAAGGACAAGAAAATGTTGCTACTTTTGGGAGTGCTTTAAACTGTCAACAACACAACAAAAGTGTTTACCCTCAGATGGTTCAATCTGATGTGAATCAAGCTTTACCTGAAAAAATGAGAGCATCTTGGTTACAAAAGCAATGGGTTGAATCTCGTTCACTTCAGTTAGAAGAGCAGAAGCTAAAGATTCAAGTCGAGATGTTGGAGCTGGATAAACAAAGATTAAGTGGCAGGAGTTTAGTAAGAAAAAAGACCAGGAGTTGGAAAAGTTGA 1242 0.4066 MEGNLSQGGMIRGGGSFGSFDLPGSMRVHRQGKHPHSMNLHHTHPCQGSSMHSSVHDGYLLTMGTLQNYDKTMSMIEFSQGDRKKNSPSDDSFAEEGVDGHHEAGKGKRGLPWQRMKWTDKMVRLLITVVSYIGEDATSDSGCERRKFTVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDLIDYLSEKEKDEVRKILSSKNLFYEEMCSYHNGNRLHLPHDSTLQRSLQLALRNIDDNDNDDIRRSYLDDHEEDDLDVETDDHDDFEENYASHAGCRGVHGATSQPLKRLKLGQGQENVATFGSALNCQQHNKSVYPQMVQSDVNQALPEKMRASWLQKQWVESRSLQLEEQKLKIQVEMLELDKQRLSGRSLVRKKTRSWKS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02398 413 Coils Coil 374 401 - -
Pumo6g02398 413 MobiDBLite consensus disorder prediction 83 109 - -
Pumo6g02398 413 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Pumo6g02398 413 MobiDBLite consensus disorder prediction 79 109 - -
Pumo6g02398 413 PANTHER F16F4.11 PROTEIN-RELATED 1 409 - -
Pumo6g02398 413 Gene3D - 118 189 - -
Pumo6g02398 413 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02398 Pumo-Chr6 48062150 48063391 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo6g02398 Myb_DNA-bind_4 3.5e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02398 - - gmx:100812134 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02398 6 48062150 48063391 Pumo6g02398 6 48062150 48063391 ECH