Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02393 ATGAAGAGGTTTTTGTTGGGGTGTGTGGCCATTGTGGAGAAAAATAGACCCTATGTTGCAATGTTGTTTATTCAGTTTGTGTATGCTGGAATGGCCTTGTTGTCCAAGGCTGCAATTTCCAAGGGAATGAGCCCTTATGTGTTCGTTGTTTATAGACAAGCCTTTGCATCAGTTGCCTTATCTCCCTTTGCTTTCTTTGACAGAAAGCAACCAGCTCCTTTGTCATGCAACTTGTTATGCAAATTGTTTCTAGTTTCCCTTGTTGGGTTAACGGCAAGTTCAAACCTTTACTATGTTTCAATCAACTATACCACTGCAACATTTGCTGCAGCCTCCACAAACACTGTCCCTGCCATTACTTTCATCATGGCTGTTCTAATTAGGGTGGAAAGCATTTCCATAAAACGTGTGCATGGATTGGCCAAGATTTTGGGCTCTGTTCTAAGCCTTGCTGGGGCAATTACATTTGCTTTAGTCAAAGGACCTCCTCTGGGTTTTATGAAATGGTATCCAGAAAATCAGAACCATAGTTCTCACCCTTTAACAATTGTTCACTCCAAAGGTGACACTATTAGAGGCTCTCTTATGATGCTCTCAGCAAACACTACATGGTCCTTGTGGCTTATCTTGCAGGGATTTGTTGTGAAGCAGTACCCTGCAAAATTTCGCCTCACTGCTATACAATGCATGTTCAGCTTCATGCAATCTACTGTTGTGGCTGTTGCAGTAGAGAGGAACAATCCTTCAGCATGGAGGCTTGGATGGGATATTCATCTTCTTTCTGTGGCTTATTGTGGTGTAATTGTAACAGGCATTTGTTATTGGCTGCAAGTCTGCACAATAGAGACGAAAGGCCCAGTCTTCACAGCAATGTTCACCCCTCTAGCTCTTATAATAACAGCAATATTCTCATCACTATTGTGGAAAGAAATTCTTTACTTGGGAAGTGTTGGTGGCACTATTTTACTAGTGGTTGGACTCTACAGTGTCCTGTGGGGGAAGAGCAAGGAGAGTCTAGAGGAGAGTGGAAAAGGAGAAAACCTAGAAGCTGAACAAACAAAAGAGGAAACCAGATTGGAATGCATTGTACAGCATTGA 1098 0.4235 MKRFLLGCVAIVEKNRPYVAMLFIQFVYAGMALLSKAAISKGMSPYVFVVYRQAFASVALSPFAFFDRKQPAPLSCNLLCKLFLVSLVGLTASSNLYYVSINYTTATFAAASTNTVPAITFIMAVLIRVESISIKRVHGLAKILGSVLSLAGAITFALVKGPPLGFMKWYPENQNHSSHPLTIVHSKGDTIRGSLMMLSANTTWSLWLILQGFVVKQYPAKFRLTAIQCMFSFMQSTVVAVAVERNNPSAWRLGWDIHLLSVAYCGVIVTGICYWLQVCTIETKGPVFTAMFTPLALIITAIFSSLLWKEILYLGSVGGTILLVVGLYSVLWGKSKESLEESGKGENLEAEQTKEETRLECIVQH 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02393 365 PANTHER WAT1-RELATED PROTEIN 17 346 IPR030184 GO:0016020|GO:0022857
Pumo6g02393 365 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020
Pumo6g02393 365 Pfam EamA-like transporter family 17 149 IPR000620 GO:0016020
Pumo6g02393 365 Coils Coil 336 356 - -
Pumo6g02393 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 150 - -
Pumo6g02393 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02393 Pumo-Chr6 47831953 47838255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02393 16 351 Nodulin-like Gene Family AT2G39510 39.466 4.16e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02393 - - gmx:100800562 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02393 6 47831953 47838255 Pumo6g02393 6 47831953 47838255 ECH