Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02364 ATGTCTCAGTTTCCGCAGGAACAAACTCAGTTTTCTTACGGTGACTCAAGGACATCCTTTCCAGGAAACAAAGGAGGAGTGCGCTGGAATGAGGAAGAACACAGGTTGTTTCTTGATGGGCTCCAAAAATATGGCAAGGGAGATTGGAAAAACATAACAAAACATTGTGTGAAGACAAAAACCCATACTCAAGTTGCTAGTCATGCCCAAAAATACTTTTCTCAACAAAGAGTTTCAAGGAGAGAGAATAAAAGAAAAAGTATTCATGACGTAAGGTTACAAAATGAAGACATGATTGTCCCTCAACACATTGATCAACAAATAAGAGCTCCTCCTCCAGAACTTTCAATGCAACAATGGCATGCAACATTACAAAACAACAACATGATCTCTCAACACATTGATCAACAGATTCAGGTTTCTCCATCAGAACTTCCAATGCAGCAATCCATGATCCCTCAACACATTGATCAACATATTCAGGTTCCTCCATCAGAACTTCCAATTCAGCAATCCATGTTCCCTCAACACATTGATCAACAGAACATTGATCCTCTATCAGAACTTCTTATGCAACAATCGTACCTGATGTTACAAAATAGAACCATGCTTCCTCAACACATTGATCAACAAAACATGGTTCCTCCATCAAAACTTCCAATTAATGCAGCAATCATACATAATGTTACAAAATAG 696 0.3836 MSQFPQEQTQFSYGDSRTSFPGNKGGVRWNEEEHRLFLDGLQKYGKGDWKNITKHCVKTKTHTQVASHAQKYFSQQRVSRRENKRKSIHDVRLQNEDMIVPQHIDQQIRAPPPELSMQQWHATLQNNNMISQHIDQQIQVSPSELPMQQSMIPQHIDQHIQVPPSELPIQQSMFPQHIDQQNIDPLSELLMQQSYLMLQNRTMLPQHIDQQNMVPPSKLPINAAIIHNVTK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02364 231 Gene3D - 27 78 - -
Pumo6g02364 231 MobiDBLite consensus disorder prediction 1 22 - -
Pumo6g02364 231 CDD SANT 28 73 IPR001005 -
Pumo6g02364 231 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Pumo6g02364 231 ProSiteProfiles Myb-like domain profile. 28 73 IPR001005 -
Pumo6g02364 231 NCBIfam myb-like DNA-binding domain, SHAQKYF class 25 76 IPR006447 GO:0003677
Pumo6g02364 231 ProSiteProfiles SANT domain profile. 24 77 IPR017884 -
Pumo6g02364 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 77 IPR017930 -
Pumo6g02364 231 MobiDBLite consensus disorder prediction 1 19 - -
Pumo6g02364 231 SMART sant 25 75 IPR001005 -
Pumo6g02364 231 FunFam transcription factor MYB1R1 27 78 - -
Pumo6g02364 231 SUPERFAMILY Homeodomain-like 23 76 IPR009057 -
Pumo6g02364 231 PANTHER TRANSCRIPTION FACTOR KUA1 23 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02364 Pumo-Chr6 46784293 46786766 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo6g02364 Myb_DNA-binding 8.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02364 - - gsj:114417662 124.405