Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02360 ATGGCTGCTTCAACAATGGCTCTCTCTTCATCATCATTGGCTGGCCAAGCAATCAAGCTTGCCCCTTCCACCCGAGAGCTTGGAACTGGAAGGGTCTCCATGAGGAAAACAGGCTCCAAGTCTGTTTCTTCAGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTATTTGGGCCCATTCTCCGGTGAGGCTCCATCTTACCTCACTGGTGAATTCGCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACTTTTGCCAGAAACCGTGAACTCGAAGTCATCCACTCCAGATGGGCCATGTTGGGAGCCTTGGGCTGTGTTTTCCCCGAACTCTTGTCCCGCAACGGTGTCAAGTTTGGCGAGGCCGTGTGGTTCAAGGCTGGATCTCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCTCAAAGCATCCTTGCCATCTGGGCCTCCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTTGGTGAGGTCACTGACCCAATCTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGTTGAAGGTTAAAGAGCTTAAGAATGGTAGGTTGGCCATGTTCTCCATGTTCGGTTTCTTTGTTCAAGCCATTGTGACTGGAAAGGGACCATTGGAGAATCTTGCCGACCACCTCGCCGACCCAGTGAACAACAATGCTTGGGCCTATGCCACAAACTTTGTTCCTGGAAAGTAA 795 0.5283 MAASTMALSSSSLAGQAIKLAPSTRELGTGRVSMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFAGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02360 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Pumo6g02360 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Pumo6g02360 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Pumo6g02360 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Pumo6g02360 264 FunFam Chlorophyll a-b binding protein, chloroplastic 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02360 Pumo-Chr6 46667949 46668754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02360 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 86.842 1.30e-170 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02360 K08912 - gmx:100800351 518.464