Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02359 ATGGCTGCTTCAACAATGGCTCTCTCTTCTCCATCATTGGCTGGACAAGCAATCAAGCTTGCCCCCTCCACCCCAGAGCTTGGAAATGGAAGGGTTTCCATGAGGAAAACAGCCTCCAAGTCTGTTTCTTCAGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCACTCTCTGGTGAGCCCCCATCCTACCTCACTGGTGAATTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACTTTTGCCTAG 276 0.5399 MAASTMALSSPSLAGQAIKLAPSTPELGNGRVSMRKTASKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02359 91 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 91 IPR001344 GO:0009765|GO:0016020
Pumo6g02359 91 MobiDBLite consensus disorder prediction 1 45 - -
Pumo6g02359 91 SUPERFAMILY Chlorophyll a-b binding protein 47 90 - -
Pumo6g02359 91 Pfam Chlorophyll A-B binding protein 64 90 IPR022796 -
Pumo6g02359 91 Gene3D Chlorophyll a/b binding protein domain 55 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02359 Pumo-Chr6 46644460 46644886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02359 1 91 Chloroplast and Mitochondria Gene Families AT2G34430 76.087 2.98e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02359 K08912 - ccaj:109815895 182.185