Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02352 ATGGTGACCCTTGATCAGTATCACCCTCCATATCGTGCCGAACAGATTCTCCACAAAGATCTTCCCCGGCAGTCGGAAATCGTCAGGGAATCAAAATTTGCACCTTCGCCTCCGCTGTCTTCCGTGGAGGTTTCGATTTTCGGTGGGTGGATGGGGAGGGGAGAGTTGCATGTGAGCCATAACTTGTTGGCCAGGGGGTTTGAGGGAGGGGTTGGTGTGGCTTTGGAGGGCGGCGGAGTTGTTGGAGTCCGACGGCGATTTGAGAGAGAAGGATATTGGTGGTGGCGGCGGAGGACAAAGGGTTGTGTTTGGGGGGAAAATGGTGGTTTTGGTGGTTGCTATTCATTTTTTTTTTCTTCCACCGATGTCCACTCCCAACGCCGATTCCGGCACGGCGCCGACAACTCCGGCAAGGAAGACGATGGGCCCCACAAGGGGTTCAAGCAGAGTAGACCCATGAATTTGGTCATTGCTCGTTCCCCGGTCTTCACTGTCCCTCCCGGGTTGAGCCCTTCTGGGTTTCTTAACTCCCCTGGCTTCTTTTACCCTCAGTATCTTCAATATATTGCAGATGGCAAGAAGTTGTTGACTCCTCAACCTCGGCTGAGAACAGGTTTCTTCGCTGTACTTGAATCCAATATGCTAACTTTGGATACCATCAAGGAGGCCTGCACTTCTGTTGGGGTTGCCAAGCATGGACGACCGATTGGGTTAGACGAAAAGATAAAGGTAGATCTTATGGTTATTGGATCTGTTGCTGTTGACCCAAGGACAGGTGCTCGATTGGGAAAGGGAGAGGGATTTGCAGAACTTGAATACGGTATGCTGCGGTACATGGGAGCCATTGACGATTCAACCCCAGTTGTTACCTCTGGTAGTTTTGGTTTCTGCCCTTCCTTTGCCATACCTTTAGAATGCATGACTGCCAATTGGTGGACGATATTCCAGTTGAAAAGCTGCCATGATGTACCAGTGGATATCATTTGTACTCCGACACAGGTCATTTTCACAAATACATCTATTCCAAAGCCTCAAGGAATTTATTGGGACAAGTTGTCTCCTGAGAAGCTGGGACAAATTCGTATACTGAGGATTGAACAAGAGACTGGACAGAAGCTTCCTACTGGTCCATCAGAGAAACTACCCCCTACTGCTCAACGAAGTAGAAGGGGTTGA 1176 0.4957 MVTLDQYHPPYRAEQILHKDLPRQSEIVRESKFAPSPPLSSVEVSIFGGWMGRGELHVSHNLLARGFEGGVGVALEGGGVVGVRRRFEREGYWWWRRRTKGCVWGENGGFGGCYSFFFSSTDVHSQRRFRHGADNSGKEDDGPHKGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFYPQYLQYIADGKKLLTPQPRLRTGFFAVLESNMLTLDTIKEACTSVGVAKHGRPIGLDEKIKVDLMVIGSVAVDPRTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGSFGFCPSFAIPLECMTANWWTIFQLKSCHDVPVDIICTPTQVIFTNTSIPKPQGIYWDKLSPEKLGQIRILRIEQETGQKLPTGPSEKLPPTAQRSRRG 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02352 391 PANTHER 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED 188 390 IPR002698 -
Pumo6g02352 391 MobiDBLite consensus disorder prediction 129 147 - -
Pumo6g02352 391 MobiDBLite consensus disorder prediction 368 391 - -
Pumo6g02352 391 Gene3D - 184 343 IPR024185 -
Pumo6g02352 391 MobiDBLite consensus disorder prediction 129 149 - -
Pumo6g02352 391 Pfam 5-formyltetrahydrofolate cyclo-ligase family 189 331 IPR002698 -
Pumo6g02352 391 SUPERFAMILY NagB/RpiA/CoA transferase-like 185 350 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02352 Pumo-Chr6 46498337 46503110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02352 147 181 WRKY Transcription Factor Family AT2G03340 63.889 8.43e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02352 K01934 - gmx:100797707 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02352 6 46498337 46503110 Pumo6g02352 6 46498337 46503110 ECH