Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02346 ATGGCTAGGGTTAGTGCTTTGTTTCACTCTATGCTCTTGATCTCTTCCCTTCTATTTGCTTCTCAAATCCATGTCTCCTCTGGGAAACTTGTCCCCGGACTAGGATGGAATTACTATTTGCTTACATGTCCCAAGCTTGAGAGGATTATAAGGAAGCATCTTGAGGATGTTTTCGAGAGGGACAGTGGAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAATGGATGCGACGCGTCTATATTGTTGAATGGAGATGGAGACGAGAAGCAACACCGTGCTAACTTTGGTTTAAGGCAAGAGGCCATTGACGCCATTGAAAACCTTCGGGTTCTTATTTACAAGCAGTGTCTACCAGTTGTCTCGTGCGCAGACATCCTTGTTATCGCAGCACGTGAAGCTGTTCGCCAATTAGGGGGCCCCGATTTTGACGTGCCACTGGGAAGAAAAGACGGCCTGGCACCCAACGCAACCGCGCCGGACAACCTTCCGGCACCATTCTTCCGAACCGACCAACTCCTCACTACATTCGGAAACAGAGGTTTGGACGCCGCCGATGTGGTCGCACTCTCCGGCGCACACACCTACGGCCGGGCCCACTGTCCCTCCCTGGTGAACAGGACCACAGAAACGGACCCACCAATCGACCCAGGCTTCAAGAACAACCTGGTCGCCACGTGTCCCAGTCCCGACTCCCCCAACACCGTCAATTTGGACCTGAGAACCCCCGTGAGGTTCGACAACATGTATTACATCAACCTCTTGAACCGCCAGGGCGTGTTCACCTCGGACCAGGACATAGCGAGCAACCCCAAAACTAAAGAGATCGTGAACCAGTTCGCTTCGGACCAGAACCAGTTTTTAAGAAATTTGAGGATGCTTTTGTGA 900 0.5167 MARVSALFHSMLLISSLLFASQIHVSSGKLVPGLGWNYYLLTCPKLERIIRKHLEDVFERDSGVAPGILRLFFHDCFPNGCDASILLNGDGDEKQHRANFGLRQEAIDAIENLRVLIYKQCLPVVSCADILVIAAREAVRQLGGPDFDVPLGRKDGLAPNATAPDNLPAPFFRTDQLLTTFGNRGLDAADVVALSGAHTYGRAHCPSLVNRTTETDPPIDPGFKNNLVATCPSPDSPNTVNLDLRTPVRFDNMYYINLLNRQGVFTSDQDIASNPKTKEIVNQFASDQNQFLRNLRMLL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02346 299 CDD secretory_peroxidase 33 293 IPR033905 GO:0004601|GO:0042744
Pumo6g02346 299 ProSiteProfiles Plant heme peroxidase family profile. 33 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 SUPERFAMILY Heme-dependent peroxidases 30 293 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Pumo6g02346 299 FunFam Peroxidase 37 175 - -
Pumo6g02346 299 Pfam Peroxidase 51 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 PANTHER - 14 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02346 299 Gene3D Peroxidase, domain 2 169 294 - -
Pumo6g02346 299 FunFam Peroxidase 168 297 - -
Pumo6g02346 299 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Pumo6g02346 299 Gene3D - 37 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02346 Pumo-Chr6 46320368 46323239 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02346 30 292 Peroxidase AT1G71695 51.301 2.06e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02346 K00430 - gmx:100795412 548.51