Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02342 ATGGCTAAGTCTAGTAGTGCTTATCCTTTGTACTCTTTGTTCTTGATTTCTTCCATTCTGTTTATTTCACACATCCATGCCTCCCAAGTAGAAGCCAAGCCCCCAGTAGTGAAGGGACTGTCGTATTCTTTCTATTCCAAAACATGTCCCAAGCTTGATTCCATTGTGAGAAAACATCTCAAGAAGGTGTTCAAGAATGACAATGGCCAAGCTCCTGCCCTACTCCGCATTTTCTTCCACGATTGCTTTGTTCAGGGATGTGATGGGTCATTGCTGCTAGATGGGAGTCCAGGTGAAAGAGACCAACCAGCCAATGGAGGCATAAGAAGTGAGGCCTTGCAAACCATTGATGACATTAGGGCTCTTGTCCATAAGGAGTGTGGAAGGATCGTTTCTTGCGCAGATATCACTGTCTTGGCAGCACGTGATTCTGTTTACCTTGCAGGAGGCCCCGATTATGCAGTGCCACTAGGAAGACGAGATGGCCTTAGCTTCAGCACATCAGGAACAAGCAATCTCCCCAAACCCTTCAACACCACCGGTGTGATCCTCGACGTTTTCGCCGCCAAAAACTTCGACGTAACCGACGTGGTCGCCTTATCCGGTGCGCACACATTTGGCATTTCCCACTGCAGTTCATTCTTCAACAGGCTCTCCCCTCTCGACCCCAACATGGACAAAACCCTGGCCAAGCAACTCCAATCCACGTGCCCGAGTGCGAACTCCGGCAACACTGCCAACTTGGACATCAGAACTCCGACAGTTTTCGACAACAAATACTACCTCGACCTCATGAACCGCCAGGGCGTGTTCACCTCCGACCAGGACTTGCTCACGGATAAGAGGACTAAAGGGTTGGTGAACGCCTTTGCGGTGAATCAAACGCTGTTCTTTGAGAAGTTCGTGGATGCTACTGTAAGGTTGAGCCAGTTGGATGTGCTCACCGGAAATCAAGGTGAAATTCGTGCCAAGTGCAATGTGGTGAATGCTAGGAAATCTTTGTTGACGTCTGTGGTGGAAGAGGTGGTGCAATTGGTTGATCAGTTTTAA 1050 0.4895 MAKSSSAYPLYSLFLISSILFISHIHASQVEAKPPVVKGLSYSFYSKTCPKLDSIVRKHLKKVFKNDNGQAPALLRIFFHDCFVQGCDGSLLLDGSPGERDQPANGGIRSEALQTIDDIRALVHKECGRIVSCADITVLAARDSVYLAGGPDYAVPLGRRDGLSFSTSGTSNLPKPFNTTGVILDVFAAKNFDVTDVVALSGAHTFGISHCSSFFNRLSPLDPNMDKTLAKQLQSTCPSANSGNTANLDIRTPTVFDNKYYLDLMNRQGVFTSDQDLLTDKRTKGLVNAFAVNQTLFFEKFVDATVRLSQLDVLTGNQGEIRAKCNVVNARKSLLTSVVEEVVQLVDQF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02342 349 SUPERFAMILY Heme-dependent peroxidases 39 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 Pfam Peroxidase 56 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 ProSiteProfiles Plant heme peroxidase family profile. 39 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 FunFam Peroxidase 43 183 - -
Pumo6g02342 349 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Pumo6g02342 349 Gene3D - 44 326 - -
Pumo6g02342 349 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 CDD secretory_peroxidase 39 328 IPR033905 GO:0004601|GO:0042744
Pumo6g02342 349 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 PANTHER - 25 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo6g02342 349 FunFam Peroxidase 174 308 - -
Pumo6g02342 349 Gene3D Peroxidase, domain 2 175 309 - -
Pumo6g02342 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02342 Pumo-Chr6 46196235 46200922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02342 1 346 Peroxidase AT1G71695 53.203 1.85e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02342 K00430 - gmx:547550 629.402