Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02293 ATGGGGTTAAATGAAAAAGAAGCTCTTGAATTGCTTGGTCAGAGTGCTTTTAAAATTGACAAAGTTGATCCATCCTACGTGAACATTTTAAACCGTGCAGTAACTTATGCTTCTGGCCTTCCATTGGCTTTGAAAGTAATTGGCTCCAACTTGTTTCAAAAAAGCATAGAAGAATGGGAATCTGCCTTAGATCAGTATCAAAGAATTCCTAATAAAGACATTCAAAGCATACTTAAAATTGATCAGCGTGGTCACGTGACATTGCATGACTTAATAGAAGACATGGATAGAGAAATTGTCCGTTGGGAATCACCAGAAGAGCCTGGAAATCGCATTGGATTCCTGGATAAACTTAAAATCTTGGATGCTAATTTCTGCAGAAAGCTCAAGAGTTTTCCACCTATCAAATTGACCTCTCTTGAAGAATTTGGTCTTTCATTTTGTGAAAGTCTTGAGTGTTTTCCAAAAATATCAGGGAAGATGGAAAATGTAACTTCCCTTTTTATTGATGACACTCCCGTAAAAGAACTGCCATCTTCAATTAAAAATCTAACTCGACTTCAAAGAATTCGTCTGAGGAGTGGTGGAATTACTCAATTACCAAGTAGCATTTTTGTGATGAAAGAACTTCGTTATTTCCATGGTCACAATTGTGAGGGGTTGCTAGTATCCAAAGAGAACGAAGGGGAAGAACAAATGAGGTCAATGGTCTTCGAAAACACCATTGATTTTCTTGAACTTTCAGAATCCAATGTATCAGACAAATTCCTTCGAAGAGGTCTCCCTTTGTTTGCCATTGTGAAAGAATTACACCTAAATCGTAATGATTTCACAATCCTACCTTCTCTGACAGAATTTTCTTTGGAATACTGTCACAATCTTAGAGAAATTAGAGTGATTACAACTAATTTAGAAACATTCTCTGTAAAAAATTGCACATCCTTGGAAGATTTAGACCTCACACTTCTTCCTACATGGAACAAAGAATGTTACCGTTTAAGGAAGCTTCTTTTACATCAATGCAAGAATCTTAAAAAAATTAAAGGGATTCCACTGAGCATAGAAGAATTGATTGTAGAATACTGCGATTCCTTGAAAGATCTAGATCTTACTCTTCCTCCTGAATGCACCCAACAATGTCGTATTTTGAGTACACTTAAATTGCATTATTGTTCGGATCTTGAAGAAATAAAAGGGATTCCTTCAGACATTGGAGAATTTTGTGCAACAGGATGCTCATCCTTGATTTCAGTGTAG 1257 0.3628 MGLNEKEALELLGQSAFKIDKVDPSYVNILNRAVTYASGLPLALKVIGSNLFQKSIEEWESALDQYQRIPNKDIQSILKIDQRGHVTLHDLIEDMDREIVRWESPEEPGNRIGFLDKLKILDANFCRKLKSFPPIKLTSLEEFGLSFCESLECFPKISGKMENVTSLFIDDTPVKELPSSIKNLTRLQRIRLRSGGITQLPSSIFVMKELRYFHGHNCEGLLVSKENEGEEQMRSMVFENTIDFLELSESNVSDKFLRRGLPLFAIVKELHLNRNDFTILPSLTEFSLEYCHNLREIRVITTNLETFSVKNCTSLEDLDLTLLPTWNKECYRLRKLLLHQCKNLKKIKGIPLSIEELIVEYCDSLKDLDLTLPPECTQQCRILSTLKLHYCSDLEEIKGIPSDIGEFCATGCSSLISV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02293 418 Gene3D Ribonuclease Inhibitor 100 238 IPR032675 -
Pumo6g02293 418 Gene3D Ribonuclease Inhibitor 267 418 IPR032675 -
Pumo6g02293 418 PRINTS Disease resistance protein signature 135 151 - -
Pumo6g02293 418 PRINTS Disease resistance protein signature 37 51 - -
Pumo6g02293 418 Gene3D - 2 83 IPR042197 -
Pumo6g02293 418 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 398 IPR044974 GO:0006952
Pumo6g02293 418 Pfam NB-ARC domain 3 75 IPR002182 GO:0043531
Pumo6g02293 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 80 IPR027417 -
Pumo6g02293 418 SUPERFAMILY L domain-like 109 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02293 Pumo-Chr6 44698496 44700881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02293 117 218 WRKY Transcription Factor Family AT4G12020 39.423 3.94e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02293 - - gmx:121173697 420.624