Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02271 ATGGAACAAAAGCAATATAGTGTACTGGACCCAGGGTTGAACTCCTCTGTGAATGTGAGTTTGGATTCCCCTTCTTTGGGGTTGACATCAATTGGGCTCTTGCAACTTTCTGATCCCAATTTGAGCCCTCCTTTTGATCTTGCTTACAGTAGTGACTATGCTGAAGGGAACAGTGTTGTGTTGAGCCTTGAGGGTGTTGAACTTGAGGGCATTGAGCAAAGTGAGAAACAGTTTAGGATGGAAGTTGCCATCATAACATCCAAGTCTGATGTTTATAGCTATGGCATGGTTTTGTTGGAGATTGTGAGTGGGAGGAGGAATTTTGATGTGTCAGAGGAAACAAATAGGAAGAAGTTCTCCAATTGGGCCTATGAAGAGTATGAGAAAGGTAACATTAGTGGAATTTTGGGCAAAAGACTAGCTAACCAAGAAGTTGACATGGAACAAGTAAGAAGAGCAATTCAGGCAAGTTTATGGTGCATCCAAGAGCTGCCATCACAGAGACCAACAATGAGCAAAGTGCTGCAAATGCTAGAAGGGGTAACTGAGCTTGAAAAGCCACCTGCCCCAAAATCAATGATAGAAGGAGCTGTTAGTGGGACCAGCACATACCTTAGTAGCAATGCCAGTGCATTCTCCACAATTGGAGTTTCACCACCTGGTCCCTCCTCTTCATCATCATTTCAGACTAGTGTTGTTTCAACCTTCACCTCAGGAAGGAACAGTGAGAAAGCAACTTCATCCCTTTACAATCAGACACGTAGAAGGATTTTGCTTCCACTTCCCTTTTTCATATTTCCAATAAGAATTGGTTCAAAGTCACATTCACATGGGACTTGA 840 0.4298 MEQKQYSVLDPGLNSSVNVSLDSPSLGLTSIGLLQLSDPNLSPPFDLAYSSDYAEGNSVVLSLEGVELEGIEQSEKQFRMEVAIITSKSDVYSYGMVLLEIVSGRRNFDVSEETNRKKFSNWAYEEYEKGNISGILGKRLANQEVDMEQVRRAIQASLWCIQELPSQRPTMSKVLQMLEGVTELEKPPAPKSMIEGAVSGTSTYLSSNASAFSTIGVSPPGPSSSSSFQTSVVSTFTSGRNSEKATSSLYNQTRRRILLPLPFFIFPIRIGSKSHSHGT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02271 279 Pfam Protein tyrosine and serine/threonine kinase 62 178 IPR001245 GO:0004672|GO:0006468
Pumo6g02271 279 PANTHER OS07G0415500 PROTEIN 85 190 - -
Pumo6g02271 279 SUPERFAMILY Protein kinase-like (PK-like) 81 179 IPR011009 -
Pumo6g02271 279 Gene3D Transferase(Phosphotransferase) domain 1 22 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02271 Pumo-Chr6 43402429 43403355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02271 36 190 Receptor kinase-like Gene Family AT5G38280 36.810 9.28e-21 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo6g02271 PK_Tyr_Ser-Thr 1.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02271 - - gmx:100795819 272.707