Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02270 ATGTTCCTCAAAACCCAATTCCTGTTCCTCACCCTTGTTATTTTAGCAACCACCACCGTCACCACCGCCATAGACCCAGGTTCTACCCTCTCAGCTTCTTCTACCAACCAAACGTGGTCTTCTCCGAGCGGCACCTTCTCCCTCGGATTCATCTCCGTTCAGCCACCGACCACCCCTCCTTCCTTCATCGCCGCCATCGTCTACTCCGGCGGCGCCCCCGTCGTCTGGTCCGCCGGCCACGGCGCCGCCGTGGACTCCGGCGGGTCCCTCCAGTTCCACACCTCCGGCTCCCTCCGCCTCGTCAACGGCTCCGGCACCACCGTGTGGAACTCCGGCACGGCGGGCGCCACGTCAGCAACCCTCGAGGACATTGGCAATTTGGTAATTTCCAACAGCACTGGCACCCTCTGGTCCAGCTTTGACCACCCCACTGATACCGTTGTGCCCTCTCAGAATTTCAGTGTTGGTAACGTTCTCACTTCTGAAAGTTACTCTTTTAATCTTAGTTCAATTGGGAATTTGACCCTGAGGTGGAACAATAGCATAAGGTACTGGACCCAGGGTTTGAACTCTTCTGTGAATGTGAGTTTGGAATCCCCTCTGTTGGCGTTGACGTCAATTGGGCTTTTGCAACTTTCTGATGTGAAATTGAGCTCTCCTGTTCTTGTTGCCTATAGTAGTGACTATGCTGAAGGGAACAGTGATGTGTTGAGGGTGTTGAAGTTGGACAATGATGGCAATTTGAGGATATATAGCACTGTTAAGGGTAGTGGAGATGCTGCTGTTAGATGGGCTGCTGTTTCGGATCAATGTGAGGTTTATGCTTACTGTGGGAACTATGGTGTGTGTAGTTACAATGATTCGAGCCCGGTTTGCGGGTGCCCGTCCGAGAATTTCGAGAGGGTTGATCCGAATGATGGTAGGGGAGGGTGCAGGAGGAAGGAGACTCTTGATAGCTGTCAAGGGAGCGAGGCTATGTTGACGTTGGATCATGCTGTGGTCTTGACTTATCCCCCTGAGGATGCAACAACTTTCCAAGGTCTATCGGCGTGTAGATCAAATTGTCTTTCGCGTTCGGGTGCCTGTTTTGCTTCTGCTTCCTTGTCAGATGGCTCGGGACTGTGTGTGATGAAAACAGAAGATTTTGCTAGTGTATATCATGATCCTTCACTGCCTAGCACTTCTTATATCAAGGTTTGTCCGCCGCTATCACCGAATCCGCCACCCTCTTCGGGGGAGACTGTGGGGGAAAGGAGGTCCAGGGTGCCTGCTTGGGTTGTGGTGGTGGTTGTTTTGGGTACCATTTTGGGTTTGATTGCCTTGGAAGGTGGTTTGTGGATGTGGTGTTGTAGGAACAGCACGAGGTTTGGTGGGTTATCTGCTCACTATGCGCTTCTTGAGTATGCTTCTGGTGCACCGGTGCAGTTCTCCTACAAGGAGCTCCAGCAAGCAACAAAGGGGTTCAAGGAGAAGCTTGGAGCTGGTGGATTTGGTGCTGTGTATAGAGGAACTCTTGTTAATAAAACTGTTGTTGCCGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAGCAGTTTAGGATGGAAGTTGCCACCATAAGTAGCACTCATCATCTGAATTTGGTGAGGCTTATTGGCTTCTGCTCGGAAGGGCGCCACCGGCTTCTGGTTTATGAGTTCATGAAAAATGGGTCTCTTGATAATTTTCTATTCCTGACAGAACAGCATTCGGGAAATTTTTTGAATTGGGAGTATCGATACAACATTGCCCTGGGCACTGCAAGAGGCATCACATACCTACATGAGGAGTGCCGTGACTGCATAGTCCATTGTGACATAAAACCTGAAAACATTCTCTTGGATGAGAACTATGTTGCCAAAGTCTCTGATTTTGGTCTTGCAAAGCTCGTTAATCCCAAGGACCACAGGCATCGGACCTTGACAAGTGTGAGAGGAACCAGAGGATATTTGGCCCCCGAATGGCTTGCGAATCTTCCCATAACATCCAAATCTGATGTTTATAGCTATGGCATGGTTTTGTTGGAGATTGTGAGTGGGAGGAGGAATTTTGATGTGTCAGAGGAAACAAATAGAAAGAAGTTCTCCAATTGGGCATATGAAGAGTTTGAGAAAGGTAACATACGTGGAATTTTGGACAAAAGACTAGCTGACCAAGAAGTTGATATGGAGCAAGTAAGACGAGCAATTCGGGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCACAGAGACCAACAATGAGCAGAGTGTTGCAAATGCTTGAAGGGGTAACAGAATTTGAAAATCCACCTGCCCCAAAATCAATGTCAGAGGGAGCTGTTAGTGGAACCAGCACATACCTTAGTAGCAATGCCAGTGCATTCTCCACAATTGGAGTTTCACCACCTGGTCCCTCCTCTTCATCATCATTTCAGACTAGTGCCGTTTCAACCTTCACCTCAGGAAGGAACACTGAGAAGACAACTGCATCCCTTTTACAATCAGACACGTAG 2511 0.4906 MFLKTQFLFLTLVILATTTVTTAIDPGSTLSASSTNQTWSSPSGTFSLGFISVQPPTTPPSFIAAIVYSGGAPVVWSAGHGAAVDSGGSLQFHTSGSLRLVNGSGTTVWNSGTAGATSATLEDIGNLVISNSTGTLWSSFDHPTDTVVPSQNFSVGNVLTSESYSFNLSSIGNLTLRWNNSIRYWTQGLNSSVNVSLESPLLALTSIGLLQLSDVKLSSPVLVAYSSDYAEGNSDVLRVLKLDNDGNLRIYSTVKGSGDAAVRWAAVSDQCEVYAYCGNYGVCSYNDSSPVCGCPSENFERVDPNDGRGGCRRKETLDSCQGSEAMLTLDHAVVLTYPPEDATTFQGLSACRSNCLSRSGACFASASLSDGSGLCVMKTEDFASVYHDPSLPSTSYIKVCPPLSPNPPPSSGETVGERRSRVPAWVVVVVVLGTILGLIALEGGLWMWCCRNSTRFGGLSAHYALLEYASGAPVQFSYKELQQATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFLTEQHSGNFLNWEYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVAKVSDFGLAKLVNPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFDVSEETNRKKFSNWAYEEFEKGNIRGILDKRLADQEVDMEQVRRAIRASFWCIQEQPSQRPTMSRVLQMLEGVTEFENPPAPKSMSEGAVSGTSTYLSSNASAFSTIGVSPPGPSSSSSFQTSAVSTFTSGRNTEKTTASLLQSDT 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02270 836 ProSiteProfiles Bulb-type lectin domain profile. 21 142 IPR001480 -
Pumo6g02270 836 PANTHER OS07G0415500 PROTEIN 7 772 - -
Pumo6g02270 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 189 IPR036426 -
Pumo6g02270 836 Gene3D - 17 141 IPR036426 -
Pumo6g02270 836 Gene3D - 143 266 IPR036426 -
Pumo6g02270 836 ProSiteProfiles Bulb-type lectin domain profile. 144 263 IPR001480 -
Pumo6g02270 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 142 - -
Pumo6g02270 836 Pfam S-locus glycoprotein domain 229 295 IPR000858 GO:0048544
Pumo6g02270 836 ProSiteProfiles Protein kinase domain profile. 486 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02270 836 FunFam S-receptor-like serine/threonine-protein kinase 460 560 - -
Pumo6g02270 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 561 770 - -
Pumo6g02270 836 Pfam D-mannose binding lectin 74 156 IPR001480 -
Pumo6g02270 836 Gene3D Transferase(Phosphotransferase) domain 1 561 776 - -
Pumo6g02270 836 CDD STKc_IRAK 492 762 - -
Pumo6g02270 836 Gene3D Phosphorylase Kinase; domain 1 460 560 - -
Pumo6g02270 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Pumo6g02270 836 SMART serkin_6 486 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02270 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 143 266 - -
Pumo6g02270 836 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Pumo6g02270 836 PIRSF SRK 1 819 IPR024171 GO:0004674
Pumo6g02270 836 MobiDBLite consensus disorder prediction 795 836 - -
Pumo6g02270 836 SUPERFAMILY Protein kinase-like (PK-like) 469 761 IPR011009 -
Pumo6g02270 836 CDD B_lectin 33 143 IPR001480 -
Pumo6g02270 836 SMART blect_4 30 143 IPR001480 -
Pumo6g02270 836 Pfam Protein kinase domain 489 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02270 Pumo-Chr6 43386835 43389755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02270 459 770 Receptor kinase-like Gene Family AT5G20050 44.000 1.81e-80 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo6g02270 Pkinase 5.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02270 - - gmx:100795819 1431