Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02266 ATGGAGCCACCCACCAAACCCAGCGACACAACAATAACAACAAAAGCTTCCACCACCACCCTTAGTGTGGAGGAGGCCAGCCAGGGCCAGGCGAGCCCACTCCGAAAAATGTTTGCCGTGGCATCCATCGCCGCCGGCATACAGTTCGGGTGGGCTCTCCAGCTCTCCCTGCTGACCCCCTACGTCCAGCTGCTGGGAGTCCCCCACGCGGCGGCCTCCTTCATCTGGCTCTGCGGGCCCATCTCCGGGCTCGTGGTGCAGCCCATTGTGGGCTATTACAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGGCGCCCCTTCATCCTCGGGGGCGCCGTGGCCGTCGCCATCGCCGTGTTCCTCATCGGCTACGCTGCCGACATAGGACACGCGGCGGGCGACGACATCACCAAGAAGACCCGCCCCCGGGCCGTCGCGGTGTTCGTCATAGGATTCTGGATCCTGGACGTGGCCAACAACATGCTCCAGGGACCCTGCCGCGCTTTTTTAGCCGACTTAGCTGCCGGCGACCAACGAAAAACGAGAATAGCCAACGGCTTCTTCTCGTTCTTCATGGCCGTCGGCAACGTGCTGGGCTACGCGGCAGGGTCATACAGCCGTCTCCATAAGATCTTCCCCTTCACGGAGACCAAGGCCTGTGACGTGTTCTGCGCGAACCTTAAAACCTGTTTCTTTTTCTCTATCCTTCTCCTTTTGTTTCTAGCAACCGTTGCTCTCCTTTACGTAAAGGACAAACAAGTTGCAGCACGCCCTGTGGACGATGACGCACAACCCTCGTGTTTCTTTCAGCTTTTCGGTGCTCTGAAGGAGCTCAAGAAACCCATGTGGATGCTGATGCTGGTGACAGCTGTGAACTGGGTGGGGTGGTTCCCTTACTTCCTGTTCGACACCGATTGGATGGGGCGCGAGGTGTACGGTGGGACAGCGGGGGAGGACGCGTACGCTGCCGGGGTGCGAGTGGGGTCGCTGGGGCTGATGATAAACGCCGTCGTTTTGGGGTTCATGTCGCTGGCGGTGGAGCCGTTGGGGAAAATGGTTGGGGGAGTGAAGAGGCTGTGGGGGATTGTGAACTTTATTCTCGCGATTGGGTTCGGAATGACGGTGGTCATCACCAAGGTGGCGGAGCACCAGCGCCACCTCAACCCCGCCGCCGTCGGCCACCCCTCCGACGGGGTCAAGGTTGGAGCCATGGTCTTCTTCGCAGTTCTCGGAGTTCCTCTTGCGATTACTTTCAGTGTTCCTTTTGCTCTAGCATCAATATACTGCACCGCTTCAGGAGCAGGCCAAGGTTTATCTTTGGGAGTTCTCAATCTTGCAATTGTTGTACCACAGATGGTGGTGTCTGCATTAAGTGGTCCTTGGGATGCTTTGTTTGGTGGTGGCAACTTGCCGGCTTTCATGGTGGGTGCCGTGGCGGCGGCGTTGAGCGCCATAATGGCGATTGTCTTGCTGCCAACTCCAAAGCCAGCTGATGAGGCCAAGGCTTCAAGCATGATGGCAGGGGGCTTTCACTAG 1536 0.5872 MEPPTKPSDTTITTKASTTTLSVEEASQGQASPLRKMFAVASIAAGIQFGWALQLSLLTPYVQLLGVPHAAASFIWLCGPISGLVVQPIVGYYSDRCTSRFGRRRPFILGGAVAVAIAVFLIGYAADIGHAAGDDITKKTRPRAVAVFVIGFWILDVANNMLQGPCRAFLADLAAGDQRKTRIANGFFSFFMAVGNVLGYAAGSYSRLHKIFPFTETKACDVFCANLKTCFFFSILLLLFLATVALLYVKDKQVAARPVDDDAQPSCFFQLFGALKELKKPMWMLMLVTAVNWVGWFPYFLFDTDWMGREVYGGTAGEDAYAAGVRVGSLGLMINAVVLGFMSLAVEPLGKMVGGVKRLWGIVNFILAIGFGMTVVITKVAEHQRHLNPAAVGHPSDGVKVGAMVFFAVLGVPLAITFSVPFALASIYCTASGAGQGLSLGVLNLAIVVPQMVVSALSGPWDALFGGGNLPAFMVGAVAAALSAIMAIVLLPTPKPADEAKASSMMAGGFH 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02266 511 Gene3D MFS general substrate transporter like domains 31 493 IPR036259 -
Pumo6g02266 511 PANTHER SUGAR TRANSPORTER 32 490 - -
Pumo6g02266 511 CDD MFS_SLC45_SUC 37 488 - -
Pumo6g02266 511 SUPERFAMILY MFS general substrate transporter 36 496 IPR036259 -
Pumo6g02266 511 Pfam MFS/sugar transport protein 37 297 - -
Pumo6g02266 511 NCBIfam sucrose/proton symporter 33 495 IPR005989 GO:0005886|GO:0008515|GO:0015770
Pumo6g02266 511 FunFam Sucrose transport protein 31 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02266 Pumo-Chr6 43109304 43112754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02266 19 511 Sucrose Transporter Gene Family AT1G22710 63.944 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02266 K15378 - gmx:100784153 885.945