Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02264 ATGGAACAACCTCCTTCCGGGTCTCTTCAGGTGGAGACAGCACAACAACCGGAACCTAGTCCACTCCGAAAAATGATCGCGGTGTCGTCAATCGCCGCGGGAATTCAATTCGGGTGGGCCCTACAGCTCTCTCTTCTGACACCGTACGTTCAGACCCTGGGCGTCCCTCACGCCTGGGCCTCCTTCATCTGGCTTTGCGGCCCGATCTCTGGGCTGGTGGTCCAGCCCATTGTAGGGTACAGCAGCGACCGATGCAAGTCCCGCTTCGGTCGCCGCCGTCCCTTCATCCTCGCGGGGGCGGTGGCAGTCGCCATCGCCGTGTTCCTCATCGGCTATGCAGCCGACATAGGACACGCGGCGGGCGACGACCTAACGAGGAAGACCCGCCCCCGCGCGGTGGCGATCTTCGTGGTGGGGTTCTGGATCCTGGACGTGGCCAACAACATGCTCCAGGGCCCCTGCCGCGCCTTCCTCGGCGACCTCGCCGCCGGGGACCACCACAAGACGAGAACCGCCAACGCCTTCTTCTCGTTCTTCATGGCCATCGGCAACGTCCTCGGCTACGCCGCCGGCTCCTACGACAAGCTCCACCGCGCCTTCCCCTTCACCCAAACCGATGCCTGCGACGTGTTCTGCGCCAATCTCAAGAGCTGTTTCTTCTTCTCCATTGTTCTCCTCCTTGTCCTCTGTTTAGTTGTGCTCACTTGTGTCAACGAACCCCAATTTACACCCGACAACAATAATGATGAAAACGACGACGTTTCCGCGTGGTCCTCGTGCTTTGGCGAACTCACCGCTGCGTTTAAGGGACTGAAGAGGCCAATGTGGATGCTGATGCTAGTGACCGCTATCAACTGGATCGCGTGGTTCCCTTACGTGTTGTACGACACCGATTGGATGGGGCGTGAGGTGTACGGTGGTAACGTGGGGGACAAAGCATACGATTCCGGAGTGCGTGCTGGAGCGTTGGGGCTTTTACTGAACTCTGTCGTTTTGGCTTTTATGTCGTTGGCGGTGGAACCGTTGGCTCGTTTCGTTGGGGGCGTTAAGTGGTTGTGGGGGATCGTTAACGTTATTCTCGCCGTTTGCATGGCAATGACGGTGGTTATCACAAAGGCTGCAGAACACGAACGGCGTCAAAACGGCGTTGCCGTTGGGCATCCATCGCTTGGTGTGAGAGCTGGTGCATTGACTTTCTTCTCCGTCCTTGGTATTCCTCTTGCGATTACTTACAGTCTCCCATTTGCTCTGGCATCTATATACTCCACCACTTCAGGAGCAGGCCAAGGTTTGTCTTTGGGTGTCCTCAACGTTGCAATTGTGGTGCCACAGATGATAGTATCGGCTATAAGTGGAAAGTGGGATTCTTGGTTTGGTGGTGGCAACTTGCCGGCGTTCGTGTTGGGTGCCGTGGCGGCCGCCGTGAGCGCCGTGTTAGCGGTTGTTCTGCTGCCAAAACCTAAGCCAGCAGATGTGGCCAAGGTTTCTTCCGTCACTGCAGGGGGTTTCCATTAG 1515 0.5729 MEQPPSGSLQVETAQQPEPSPLRKMIAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLVVQPIVGYSSDRCKSRFGRRRPFILAGAVAVAIAVFLIGYAADIGHAAGDDLTRKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDHHKTRTANAFFSFFMAIGNVLGYAAGSYDKLHRAFPFTQTDACDVFCANLKSCFFFSIVLLLVLCLVVLTCVNEPQFTPDNNNDENDDVSAWSSCFGELTAAFKGLKRPMWMLMLVTAINWIAWFPYVLYDTDWMGREVYGGNVGDKAYDSGVRAGALGLLLNSVVLAFMSLAVEPLARFVGGVKWLWGIVNVILAVCMAMTVVITKAAEHERRQNGVAVGHPSLGVRAGALTFFSVLGIPLAITYSLPFALASIYSTTSGAGQGLSLGVLNVAIVVPQMIVSAISGKWDSWFGGGNLPAFVLGAVAAAVSAVLAVVLLPKPKPADVAKVSSVTAGGFH 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02264 504 Gene3D MFS general substrate transporter like domains 19 485 IPR036259 -
Pumo6g02264 504 Pfam MFS/sugar transport protein 31 288 - -
Pumo6g02264 504 CDD MFS_SLC45_SUC 25 466 - -
Pumo6g02264 504 SUPERFAMILY MFS general substrate transporter 23 490 IPR036259 -
Pumo6g02264 504 PANTHER SUGAR TRANSPORTER 22 483 - -
Pumo6g02264 504 NCBIfam sucrose/proton symporter 21 488 IPR005989 GO:0005886|GO:0008515|GO:0015770
Pumo6g02264 504 FunFam Sucrose transport protein 19 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02264 Pumo-Chr6 43060898 43064130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02264 1 504 Sucrose Transporter Gene Family AT1G22710 64.717 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02264 K15378 - gmx:100782007 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02264 6 43060898 43064130 Pumo6g02264 6 43060898 43064130 ECH