Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02249 ATGCTGTCTATTATTCCTTTGGATATCTCGGTATCCTCAACTCTTACCAAAGTCTCACCTTTCAATATCAGTTTTAAGAAACCAACCACTTTCCCATCCAAGGTTTCACCTTCCTCTAATGAATTCTCTCTGCAATATTCTCTCTCCCAGTCAGGAATTTGCAGGGCTAGTCAAGTTGTTGATTTGTTCCCAACCGTGTCCCCCGAAATTATTGTCCGCGAGGCAAGGTTGGAGGACTACTGGGGAGTGGCAGAGACTCACTGCAAGTGCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGCTGAGGATAGACAGATTGGTGGTGGCTATGTTAGCGGCTATGTTAGCCGGATTCTTTAGGCCGAGAGATTGCAGAAGAATCTGTTTGGTGGCTGTTATTGACAGCTCACTTGATGAGTCCTTTTCATTTGGAAGTGGGGGTCTCAAGATTGGTGGTTTTGATGGGAAATTCAGCCTCAACAAGGGCTATGTGGCTGGTATTTTAACAGTGGACAATAATGCAGACTTTCTACCAAGAAAGGGGCCACGGCGACATAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGGGAAATTTTTCGCAGGAAGGGGATAGCTAAAAAATTGATAGCAAAGGCAGAGTCTCATGCCAGAAGTTGGGGCTGTCGTGCCATTGCATTGCACTGTGACTTGAACAATCCTGTGGCCACAATGTTGTACAAAGGCCAGGGTTACAAATGTATCATGGTTCCAGAAGGAGCAAAGTGGCCTCAGCCAAGGACCTCACCAGATGTCAGATTCAACTTCATGATGAAACTTCTCAAAAATTCAGCAGCTTCTAATTGA 858 0.4487 MLSIIPLDISVSSTLTKVSPFNISFKKPTTFPSKVSPSSNEFSLQYSLSQSGICRASQVVDLFPTVSPEIIVREARLEDYWGVAETHCKCFFPEYSFPLDFVLRIDRLVVAMLAAMLAGFFRPRDCRRICLVAVIDSSLDESFSFGSGGLKIGGFDGKFSLNKGYVAGILTVDNNADFLPRKGPRRHRRTGIAYISNVAVREIFRRKGIAKKLIAKAESHARSWGCRAIALHCDLNNPVATMLYKGQGYKCIMVPEGAKWPQPRTSPDVRFNFMMKLLKNSAASN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02249 285 Gene3D - 71 263 - -
Pumo6g02249 285 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 65 278 IPR016181 -
Pumo6g02249 285 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 282 - -
Pumo6g02249 285 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 103 276 IPR000182 GO:0016747
Pumo6g02249 285 Pfam Acetyltransferase (GNAT) family 166 249 IPR000182 GO:0016747
Pumo6g02249 285 CDD NAT_SF 185 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02249 Pumo-Chr6 42388720 42392241 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo6g02249 Acetyltransf_1 5.5e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02249 - - gmx:100803930 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02249 6 42388720 42392241 Pumo3g01294 3 20595114 20597929 PCT