Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02245 ATGCAAGGATTCTTAGATGTATCAACTCAATTGAAGAAATCACTATCTGAGGCACTAACCATTTTCTACCCTCTTGGAGGTAGAAGAGGTGATTTCTTCTCAATTGATTGCAACGATGAAGGTGCAATTTACATGGAAGCTTTAGTGAATATCAACATGGAAGAGTTCCTAAACCCACCCAAATTAGAATTGCTAAATCAATTACTTCCATGTGAGCCTAACAAGTGTCATCCCTACCAAGAAGTCTTGCCCCAACTACTTGTTCAAGTGAACCTTTTCCAATGTGGAGGAATAGCAATTGGCTTGTGCAACCTCCACATCCTCTTAGATGCATATTCTTGTAGTACTTTCTTGAAAACTTGGTTTTCCATTTGCAAAGGCTCAAAGGAAGAAATATCATGGCCAGATTTTTTTTCTGCTTCTTCTTTCTTCCCTCCAAGGAACACCATTGGTGTACGTGCTGGCATGCTAAATATTAACAAAGACTCAACTGTAGAAGCAAAGTGTACCACAAGAAGATTCTTGTTTGATTCCAAAGCCATCAATGACCTAAAAACCATGTTAACAAGTCATGATACAAAACCTACACGATACCAAGTAGTGTCTTCATTCATATGTAAACATATGATTGTAGCATGCATAGAGGAATCTTGTGATAGAACAAGACCAATGGTTGCATTACATGTTGTGGACATGAGGAAAAGGATGGGAGAGCCTTTCTCAAAAGGTTCTATTGGAAACTTGTTATGGCCTGCGTTGGTTCTTTTGGAGGATGTCAACAAGAACACTAATGTTAGAGATTTAGTTAGAGTTTTAGAAGAAGGACTTGGAAAGCTCACTAAGGAATTGTTTCTAAGGGTGCAAAATGATCCTAGATTTTTGTGGAGTGATGAGTGTGCACAACTAATGCTTGAAGGTATAGCCACTAAAAACCCAATTACCTTTGTGTTCACAAGTTGGGCTAATATGGGATTCAACGAGGTGGATTTTGGAAAGGGAAAGCCTTTGTGGTTGGCTCAAAGGGGAGGCACTAAAGAAACTATCCCAAACACAGTAGTATTGATGGAAACAAAAGAGGGAATAGAGGGATGGGTGACAATGGCAGAGAAACATATATCTATCTTGGAAAACGATAAGGACTTCCTCCAATATGCATTGCTTAATCCTAGTGTTTCAAACATATAG 1185 0.3882 MQGFLDVSTQLKKSLSEALTIFYPLGGRRGDFFSIDCNDEGAIYMEALVNINMEEFLNPPKLELLNQLLPCEPNKCHPYQEVLPQLLVQVNLFQCGGIAIGLCNLHILLDAYSCSTFLKTWFSICKGSKEEISWPDFFSASSFFPPRNTIGVRAGMLNINKDSTVEAKCTTRRFLFDSKAINDLKTMLTSHDTKPTRYQVVSSFICKHMIVACIEESCDRTRPMVALHVVDMRKRMGEPFSKGSIGNLLWPALVLLEDVNKNTNVRDLVRVLEEGLGKLTKELFLRVQNDPRFLWSDECAQLMLEGIATKNPITFVFTSWANMGFNEVDFGKGKPLWLAQRGGTKETIPNTVVLMETKEGIEGWVTMAEKHISILENDKDFLQYALLNPSVSNI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02245 394 Pfam Transferase family 7 381 - -
Pumo6g02245 394 Gene3D - 2 153 IPR023213 -
Pumo6g02245 394 PANTHER F21J9.9 7 385 - -
Pumo6g02245 394 Gene3D - 166 384 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02245 Pumo-Chr6 42335322 42336506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02245 11 376 Monolignol Biosynthesis Gene Families AT5G48930 22.959 1.44e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02245 - - gmx:102667966 709.909