Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02236 ATGACTGCAGCCAGGGGAACCTTGGGTTACATTGCCCCTGAAGTTTTCTCAAGGAACTTCGGTAACGTGTCGTACAAGTCTGACATTTACAGCTTTGGAATGTTGCTCCTAGAGATGGTTGGAGGAAGAAAGAATACAAATGTAGACGTGCAAATTAGTGTTGAGGATGATGAAGATGTTCAAATTGCCAAGAAACTTGCCATAGTAGGACTTTGGTGCATTCAGTGGAACCCAGTGGACCGTCCGTCCATGAGAACTGTGGTACAAATGCTTGAAGAGGAGGGAGACGAGTTAACAGCACCCGCTACTCCTTTTGACATCACCAGTTCTTCAAGAATAAATGTCCTTGTTCCAGTGAAACATCATAATTTCGAGTTGGAAGTTATTCATCAAATAGAAGAATAA 405 0.4272 MTAARGTLGYIAPEVFSRNFGNVSYKSDIYSFGMLLLEMVGGRKNTNVDVQISVEDDEDVQIAKKLAIVGLWCIQWNPVDRPSMRTVVQMLEEEGDELTAPATPFDITSSSRINVLVPVKHHNFELEVIHQIEE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02236 134 Pfam Protein tyrosine and serine/threonine kinase 6 91 IPR001245 GO:0004672|GO:0006468
Pumo6g02236 134 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 109 IPR045874 GO:0004672
Pumo6g02236 134 SUPERFAMILY Protein kinase-like (PK-like) 2 118 IPR011009 -
Pumo6g02236 134 Gene3D Transferase(Phosphotransferase) domain 1 1 104 - -
Pumo6g02236 134 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02236 Pumo-Chr6 41885649 41886119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02236 4 104 Receptor kinase-like Gene Family AT5G39030 44.882 3.68e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pumo6g02236 PK_Tyr_Ser-Thr 1.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02236 - - gmx:102669457 212.616