Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02224 ATGGATTTCACAGCGGAGAAGAAGGAATCCGAGACCAACAACAATAACCCTGAAATTGTTCATCAAACGTTAGATTCTTCTTCTCAATTGGCATCGGCACTCGATTCCAACAACAACAAAGAAATCGAAGAACGACAAGCACGTGAACTCAAAGCCGGTCTTCACCCACTAAAGCACAAGTTTGTCTTTTGGTACACACGTCGAACACCTGGAGTTCGAAATCAAACATCGTACGAGGACAATATAAAGAAAATTGTTGAATTTAGCACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTGCTCGTCCTTCTTCTTTGCCTAGTCCAACAGATTTGCACCTTTTCAAGGAAGGAATCCGTCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTCTCAGGTCGATTTTGGGAGGACCTGGTTCTTGCCTTAGTGGGTGACCAATTGGATTATGGGGATAACATATGTGGTGCAGTATTAAGCATTCGTTTCAACGAGGATATATTGAGTGTCTGGAACCGCAATGCTTCCGACCATCAGGCTGTAATGGCTCTGAGAGATTCAATCAAACGCCACTTAAAGCTTCCTCACAGCTATGTTATGGAGTACAAGCCCCATGACGCCTCTCTGCGAGACAATTCATCCTACAGGAACACTTGGTTGAGAGGCTAG 705 0.4397 MDFTAEKKESETNNNNPEIVHQTLDSSSQLASALDSNNNKEIEERQARELKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKKIVEFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02224 234 FunFam Eukaryotic translation initiation factor NCBP 26 227 - -
Pumo6g02224 234 ProSitePatterns Eukaryotic initiation factor 4E signature. 112 135 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Pumo6g02224 234 SUPERFAMILY eIF4e-like 34 230 IPR023398 -
Pumo6g02224 234 MobiDBLite consensus disorder prediction 15 37 - -
Pumo6g02224 234 Gene3D RNA Cap, Translation Initiation Factor Eif4e 28 227 IPR023398 -
Pumo6g02224 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 28 223 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pumo6g02224 234 Pfam Eukaryotic initiation factor 4E 56 214 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pumo6g02224 234 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02224 Pumo-Chr6 41691870 41696315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02224 43 234 Eukaryotic Initiation Factors Gene Family AT5G18110 86.979 9.16e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02224 K03259 - gmx:100499744 449.129