Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02220 ATGGCAATTTTCATTGCAATTGTAGCAGCTAGTTTTCTTCTGGGCATTGTCATCCAGCTGGTTGTGTCAAGAAAATTCCATCACCATCCTCAAGTCATCCAAAGTCATTTCCTAGCACATAATGCGATGCACAGATCAAGCATTGACTTCTCAAAAGCCATGGAAATTGTTGCTAATGCATCAAATGTTACTCTGAAGACAACGTTTTCAACTTATTACAAGGCCATTATGCCATCTGGGTCAATCTATTTTATCAAGAAACTAAATTTTTCTGACAAGATATTGCCAGTGGGAGGTCATGATAAATTTGGGAAAGAACTAGAAGTCTTGGCAAAATTGAACAATTCAAATGTCATGACTCCTTTAGCCTATATTCTGTCCAGTGATACTGCTTATCTATTATATGAATTTGTCTCAAATGGCTCCCTCTTTGATGTTCTTCATGGAAGCATGGGAGATTCTTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGGGTGGCTCAAGGACTGTCTTTTCTTCACGGATTTGCCTCTGGTCCAATACTACTCCTTGACCTATCAAGTAAAAGTATTATGCTGAAGTCCCTTGAGGAGCCTCTAGTTGGGGATATTGAACACTACAAGGTGCTTGATCCCTCAAAGAGTACAGGGAATTTTTATGCAGTTGTTGGTTCTGTTGGTTATATTCCACCAGAGTATGCATACACAATGACAGTAACAATGACTGGGAATGTCTATAGTTTTGGTGTCATTCTGCTCGAACTGCTGACAGGAAAACCTCCAGTGACTGAGGGAACAGAATTGGTCAAGTGGGTTTTGCGTAATTCAACAAACCCAGAATACATTCTTGATTTTAATGTCAGTAAAACATCACATGTAGTCAGAAACCAAATGCTTGAACTCCTAAAGATTTCTTTTGTTTGTGTTAGTACATCCCCGGAAGCAAGACCAAATATGAACAGTGTTCTACAGATGCTTCTACAAGTTAGATGA 996 0.3906 MAIFIAIVAASFLLGIVIQLVVSRKFHHHPQVIQSHFLAHNAMHRSSIDFSKAMEIVANASNVTLKTTFSTYYKAIMPSGSIYFIKKLNFSDKILPVGGHDKFGKELEVLAKLNNSNVMTPLAYILSSDTAYLLYEFVSNGSLFDVLHGSMGDSLDWASRYSIAVGVAQGLSFLHGFASGPILLLDLSSKSIMLKSLEEPLVGDIEHYKVLDPSKSTGNFYAVVGSVGYIPPEYAYTMTVTMTGNVYSFGVILLELLTGKPPVTEGTELVKWVLRNSTNPEYILDFNVSKTSHVVRNQMLELLKISFVCVSTSPEARPNMNSVLQMLLQVR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02220 331 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 26 137 - -
Pumo6g02220 331 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 138 331 - -
Pumo6g02220 331 Gene3D Transferase(Phosphotransferase) domain 1 138 331 - -
Pumo6g02220 331 ProSiteProfiles Protein kinase domain profile. 58 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02220 331 Gene3D Phosphorylase Kinase; domain 1 23 137 - -
Pumo6g02220 331 Pfam Protein kinase domain 68 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02220 331 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 327 - -
Pumo6g02220 331 SUPERFAMILY Protein kinase-like (PK-like) 68 327 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02220 Pumo-Chr6 41547983 41554388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02220 28 331 Receptor kinase-like Gene Family AT2G41820 41.270 5.05e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo6g02220 Pkinase 1.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02220 - - gmx:100796647 525.013