Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02216 ATGGTGAGGGTTAGTGTGTTGAACGATGCTCTCAAGAGCATGTACAATGCTGAGAAAAGGGGGAAGCGCCAAGTCATGATTAGGCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAATGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCGTTTTGATGTGGGTGTTAAAGAGATTGAAGGTTGGACTGCTAGACTTCTCCCCTCAAGACAGTCATCGTCGGAAGCAATGACTAAACTCCGTTGGGGATGTGAGTGCATACCAAGGTGGGTATTCTCCTTCCAATATGGTTTATTCCATACTCAAAGTGACATCACCAGGATTTGA 408 0.4461 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQSSSEAMTKLRWGCECIPRWVFSFQYGLFHTQSDITRI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02216 135 FunFam 40S ribosomal protein S15a 1 69 - -
Pumo6g02216 135 Pfam Ribosomal protein S8 7 98 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo6g02216 135 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 99 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo6g02216 135 Gene3D - 1 69 - -
Pumo6g02216 135 SUPERFAMILY Ribosomal protein S8 4 98 IPR035987 GO:0003735|GO:0005840|GO:0006412
Pumo6g02216 135 Gene3D - 70 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02216 Pumo-Chr6 41265534 41266479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02216 1 105 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 91.429 7.45e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02216 K02957 - cit:102609319 197.208