Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02188 ATGCACTCGGTGCTGAAGCCTCCCTCCCCCTCTGCCGCCGCCGCCGCCGCCGGCCAGATCCGCTTCCGCTCCCCCTCCTCCGCCGAGCTCCTCGCCGCCGCCGAGCTGGAACTCGAGACCACCAAAATGCTCAAGCGCTCCGGCCGCGCGTCGGCGGCGCCGCCGCCGGAGTCGCTCGCCGACAAGATGTACCACCTCCGGGGAGCGTTCCTCATGGTGGCGGTGCCGCTCCTCCTCGTCACGCTCGTGCTCTACGCCATGCCGTCCACCTCCTCCAGCGAGTCCATCGAGGACTACGCCCTCACGCACCGCAAGGCCGCCCCCGATCGCTCCACCTCCTTCGCCGTCATCTTCGACGCCGGCAGCTCCGGCAGCCGCGTCCACGTCTTCCGCTTCGACCGGAACCTGGATCTCGTTCCCATCGGGAAGGGCCTCGAGCTTTTCGTTCAGATTAAACCTGGTTTGAGTGCTTATGCACAGAATCCACGACAGGCAGCTGACTCTTTGATTTCTCTATTGGATAAAGCAGAGAGTGTTGTTCCTCGGGAGTTTCGGCCAAAGACACCCGTTAGAGTTGGGGCAACTGCAGGTTTGAGGGCTTTGGAAGGGGATGCTTCTGACAGGATTTTGCAAGCGGTTCGGGATTTGCTTAAGCAAAGAAGCACTCTAAAATCTGAGCCTGATGCGGTAACAGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTGACTATCAACTATCTACTGGGAAACTTGGGAAAAGATTATTCAGAGACTGTTGGGGTAGTTGATCTTGGAGGTGGATCAGTTCAGATGGCATATGCCATCTCAGAGACAGATTCTGCCAAGGCTCCGAAAGTATCAGTTGGAGAGGACCCATATGTCAAGGAGATGTTCCTAAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGGGCTATGGTTTACTAGCAGCTCGTGCAAAGATTTTAAAGGTTTCGGATGATTCTGGAAACCCTTGCATCTTAGATGGCTATAACGGATCTTACATTTATGGAGGAAAATCGTTTAAGGCTTCATCCTCCCCTTCTGGTGCAAGCTTGAATGAATGCAAAAGCATAGCTCTTAAGGCTCTCAAGGTTAATGAGTCAAAATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGTGGGGGTGATGGACAGAAAAACCTATTTGTTGCCTCATTTTTCTTTGACCGGGCAGCTGAGGCTGGTTTTGCCGATCCAAACTTACCCGTTGTGAAGGTTCGTCCTGTGGATTTTGAGGCTGCAGCTAAGCAAGCTTGTAAAACAAAACTTGAAGATGCCAAATCCTCTTATCAACGTGTTGAGGAAGGGAACCTTCCATATTTATGCATGGACCTCGTATACCAGTATACATTGCTTGTTCTTGGATTCGGCCTAGATCCATGGCAACAGATTACGTTAGTGAAGAGAGTTAAATATCACAATGCTTTTGTTGAAGCTGCATGGCCCTTAGGCAGTGCCATAGAAGCTGTATCATCTACATAA 1548 0.5155 MHSVLKPPSPSAAAAAAGQIRFRSPSSAELLAAAELELETTKMLKRSGRASAAPPPESLADKMYHLRGAFLMVAVPLLLVTLVLYAMPSTSSSESIEDYALTHRKAAPDRSTSFAVIFDAGSSGSRVHVFRFDRNLDLVPIGKGLELFVQIKPGLSAYAQNPRQAADSLISLLDKAESVVPREFRPKTPVRVGATAGLRALEGDASDRILQAVRDLLKQRSTLKSEPDAVTVLDGTQEGAFQWVTINYLLGNLGKDYSETVGVVDLGGGSVQMAYAISETDSAKAPKVSVGEDPYVKEMFLRGRKYYLYVHSYLGYGLLAARAKILKVSDDSGNPCILDGYNGSYIYGGKSFKASSSPSGASLNECKSIALKALKVNESKCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNLPVVKVRPVDFEAAAKQACKTKLEDAKSSYQRVEEGNLPYLCMDLVYQYTLLVLGFGLDPWQQITLVKRVKYHNAFVEAAWPLGSAIEAVSST 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02188 515 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 233 248 IPR000407 GO:0016787
Pumo6g02188 515 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 60 514 IPR000407 GO:0016787
Pumo6g02188 515 Pfam GDA1/CD39 (nucleoside phosphatase) family 109 514 IPR000407 GO:0016787
Pumo6g02188 515 Gene3D - 114 509 - -
Pumo6g02188 515 FunFam Apyrase 1 234 493 - -
Pumo6g02188 515 CDD NBD_sugar-kinase_HSP70_actin 116 275 - -
Pumo6g02188 515 Gene3D Exopolyphosphatase. Domain 2 234 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02188 Pumo-Chr6 40526527 40534508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02188 57 514 Calmodulin-binding Proteins AT3G04080 70.217 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02188 K14641 - gmx:100804818 847.81