Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02180 ATGCTCAAGCGCTCCGGCCGCGCGTCGGCGGCGCCGCCGCCGGAGTCGCTCGCCGACAAGATGTACCACCTCCGGGGAGCGTTCCTCATGGTGGCGGTGCCGCTCCTCCTCGTCACGCTCGTGCTCTACGCCATGCCGTCCACCTCCTCCAGCGAGTCCATCGAGGACTACGCCCTCACGCACCGCAAGGCCGCCCCCGATCGCTCCACCTCCTTCGCCGTCATCTTCGACGCCGGCAGCTCCGGCAGCCGCGTCCACGTCTTCCGCTTCGACCGGAACCTGGATCTCGTTCCCATCGGGAAGGGCCTCGAGCTTTTCGTTCAGATTAAACCTGGTTTGAGTGCTTATGCACAGAATCCACGACAGGCGGCTGATTCTTTGATTTCTCTATTGGATAAAGCAGAGAGTGTTGTTCCTCGGGAGTTTCGGCCAAAGACACCCGTTAGAGTTGGGGCAACTGCAGGTTTGAGGGCTTTGGAAGGGGATGCTTCTGACAGGATTTTGCAAGCGGTTCGGGATTTGCTTAAGCAAAGAAGCACTCTAAAATCTGAGCCTGATGCGGTAACAGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTGACTATCAACTATCTACTGGGAAACTTGGGAAAAGATTATTCAGAGACTGTTGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAGATGGCATATGCCATCTCAGAGACAGATGCTGCCAAGGCTCCGAAAGTATCAGTTGGAGAGGACCCATATGTCAAGGAGATGTTCCTAAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGGGCTATGGTTTACTAGCAGCTCGTGCAAAGATTTTAAAGGTTTCGGATGATTCTGGAAACCCTTGCATCTTAGATGGCTATAACGGATCTTACATTTATGGAGGAAAATCGTTTAAGGCTTCATCCTCCCCTTCTGGTGCAAGCTTGAATGAATGCAAAAGCATAGCTCTTAAGGCTCTCAAGGTTAATGAGTCAAAATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGTGGGGGTGATGGACAGAAAAACCTTTTTGTTGCCTCATTTTTCTTTGACCGGGCAGCTGAGGCTGGTTTTGCCGATCCAAACTTACCCGTTGTGAAGGTTCGTCCTGTGGATTTTGAGGCTGCAGCTAAGCAAGCTTGTAAAACAAAACTTGAAGATGCCAAATCCTCTTATCAACGTGTTGAGGAAGGGAACCTTCCATATTTATGCATGGACCTCGTATACCAGTATACATTGCTTGTTCTTGGATTCGGCCTAGATCCATGGCAACAGATTACGTTAGTGAAGAGAGTTAAATATCATGATGCTTTTGTTGAAGCTGCATGGCCCTTAGGCAGTGCCATAGAAGCTGTATCATCTACATAA 1422 0.4972 MLKRSGRASAAPPPESLADKMYHLRGAFLMVAVPLLLVTLVLYAMPSTSSSESIEDYALTHRKAAPDRSTSFAVIFDAGSSGSRVHVFRFDRNLDLVPIGKGLELFVQIKPGLSAYAQNPRQAADSLISLLDKAESVVPREFRPKTPVRVGATAGLRALEGDASDRILQAVRDLLKQRSTLKSEPDAVTVLDGTQEGAFQWVTINYLLGNLGKDYSETVGVVDLGGGSVQMAYAISETDAAKAPKVSVGEDPYVKEMFLRGRKYYLYVHSYLGYGLLAARAKILKVSDDSGNPCILDGYNGSYIYGGKSFKASSSPSGASLNECKSIALKALKVNESKCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNLPVVKVRPVDFEAAAKQACKTKLEDAKSSYQRVEEGNLPYLCMDLVYQYTLLVLGFGLDPWQQITLVKRVKYHDAFVEAAWPLGSAIEAVSST 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02180 473 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 18 472 IPR000407 GO:0016787
Pumo6g02180 473 Pfam GDA1/CD39 (nucleoside phosphatase) family 67 472 IPR000407 GO:0016787
Pumo6g02180 473 CDD NBD_sugar-kinase_HSP70_actin 74 233 - -
Pumo6g02180 473 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 191 206 IPR000407 GO:0016787
Pumo6g02180 473 Gene3D - 72 467 - -
Pumo6g02180 473 Gene3D Exopolyphosphatase. Domain 2 192 451 - -
Pumo6g02180 473 FunFam Apyrase 1 192 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02180 Pumo-Chr6 40391540 40398688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02180 15 472 Calmodulin-binding Proteins AT3G04080 70.217 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02180 K14641 - gmx:100804818 850.892