Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02174 ATGGGAACCTCTAATAACCATGATGCTCCTCCTCCACTTCCTCTACTCCAAGACCTGAAGGTGACCATCCACAACTCCTCCATGATTTTCCCATCCAAAGAGATTGAGAGAAAGTCCTTGTTCTTGTCAAACATTGACAAGGTCCTCACCTTTGAAGTGGAAACGGTTCACTTCTTTGGTGCCCACAAGGACTTTCCTCCTCATGTTGTGAATGAGAGGCTCAAGAGTGCCCTAGAGGATGCCCTTGTGGTTTATGACTTCTTGGGTGGAAGATTGAGGCTGAACTTTGATACCAAAAGATTAGAGATGGATTGTAACCCAGAGGGAGCTGGCTTCGTGGTGGCTTCTAGTGAGTACAATTTGGATCAGATAGGGGATTTGGATTATCCAAATCCAGCTTTTGCACAATTGGTACACAAGAATAAGGATTTTCTTAAACAGGGTGATGTTCCACTGTGTGTTGCCCAGGTGACATCCTTCAAGTGTGGTGGTTTTGCAATTGGCTTCTCTACTAGCCACACCACCTTTGATGGGCTCAGCTTCAAAACCTTCCTAGACAACATTGCTTCAATCTCCACTAAAAAGCCCTTGGCTGTCACCCCCTACCACGACAGGCACCTCTTAGCCGCCCGATCCCCACCACGTGTCACCTTCCCACACCCCGAGATGCTCAAGCTAAGTGACCTCCCAACAAGCCCCGAGTCCAACATCTTTGAGGCCTCCACCGAACAACTTGACTTCAAGGTCTTCAAACTAACCTCAAACGACATCACAAAATTGAAGGAAGAGGCCAAGAATTCAATTAGTGGTGGCACGAGTACACGTGTCACAGGCTTTAACGTTATCACTGCCCACATATGGAGATGCAAGGCACTATCTTGTGATGATGATCCTAATAGGTCATCAACTATACTATATGCTGTGGATATACGTTCAAGGTTGAACCCTCCATTGCCCAAATCATACACGGGTAACGCGGTGTTAACCGCTTATGCCACAGCTAAGTGTAAGGAACTAGAAGAATGGCCTTTTATGAAGTTGGTTGAAATGGTTCGTGAGGGAGCAACTAGGATGACAGATGAGTATGCAAGGTCGATCATAGATTGGGGAGAGATAAATAATGGGTTTCCAAATGGTGAGGTTTTGGTGTCTTCATGGTGGAGATTAGGTTTTGAAGAGGTGGAGTATCCATGGGGGAAGCCAAAGTATTGTTGCCCTGTGGTGTATCATAGGAAGGATATTGTTTTGTTGTTTCCTCCGGTTGGTGGAGGTGAAGGGGTGAGTATTATTGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTCTATGGGCTCTTCAATAAGTTCTTGACCTGA 1353 0.4582 MGTSNNHDAPPPLPLLQDLKVTIHNSSMIFPSKEIERKSLFLSNIDKVLTFEVETVHFFGAHKDFPPHVVNERLKSALEDALVVYDFLGGRLRLNFDTKRLEMDCNPEGAGFVVASSEYNLDQIGDLDYPNPAFAQLVHKNKDFLKQGDVPLCVAQVTSFKCGGFAIGFSTSHTTFDGLSFKTFLDNIASISTKKPLAVTPYHDRHLLAARSPPRVTFPHPEMLKLSDLPTSPESNIFEASTEQLDFKVFKLTSNDITKLKEEAKNSISGGTSTRVTGFNVITAHIWRCKALSCDDDPNRSSTILYAVDIRSRLNPPLPKSYTGNAVLTAYATAKCKELEEWPFMKLVEMVREGATRMTDEYARSIIDWGEINNGFPNGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIVLLFPPVGGGEGVSIIVALPPKEMEKFYGLFNKFLT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02174 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 441 - -
Pumo6g02174 450 Gene3D - 17 224 IPR023213 -
Pumo6g02174 450 Gene3D - 232 447 IPR023213 -
Pumo6g02174 450 Pfam Transferase family 19 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02174 Pumo-Chr6 40244732 40251081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02174 19 449 Monolignol Biosynthesis Gene Families AT5G48930 31.042 4.97e-56 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02174 K13065 - gmx:100305576 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02054 5 56753796 56756615 Pumo6g02174 6 40244732 40251081 PCT