Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02167 ATGGAAAAGCGGCACAACTATGTTAGAAAAACAGCAGAACTTGCTACTCAGTTTTTCATCAATCCTGCCACCAGTCAACCTAATGTTTCTGGACTTATACTTGCTGGTTCTGCTGACTTCAAGACTGAGCTGAGTCAGTCAGATATGTTTGACCCTCGATTGCAAGCAAAAATATTAAATGTGGTAGATGTTTCTTATGGTGGGGAAAATGGATTCAATCAAGCTATTGAGTTGTCTGCAGAGATTTTATCAAATGTGAAGTTCATTCAAGAGAAACGCTTGATAGGGAAATATTTTGAAGAGATCAGCCAGGACACTGGGAAATATGTCTTTGGGGTTGAGGACACTTTGAAGGCTCTGGAGATGGGTGCTGTGGAAACACTCATTGTGTGGGAAAATTTGGATATTAATAGGTATGTGCTGAAAAATGGTACCACTGGTGAGATTGTCATAAAGCACTTGAGCAAGGACCAAGAGACTAATCAAAGCCACTTCCGCGATTCGGCTACGTCTGCAGAGTTGGAAGTTCAGGAGAAGATGCCCTTGCTTGAGTGGTTTGCCAATGAGTACAAAAAGTTTGGATGCTCCCTGGAATTTGTGACCAACAAATCTCAAGAGGGGTCACAATTCTGCAGAGGGTTTGGTGGCATTGGTGGAATTCTTCGTTACCAGCTTGACATCAGATCATTTGATGAGTTATCTGATGATGGAGAAGTGTATGAGGATTCTGATTAA 735 0.4177 MEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVEDTLKALEMGAVETLIVWENLDINRYVLKNGTTGEIVIKHLSKDQETNQSHFRDSATSAELEVQEKMPLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDELSDDGEVYEDSD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02167 244 Pfam eRF1 domain 2 2 84 IPR005141 -
Pumo6g02167 244 Gene3D eRF1 domain 2 1 85 IPR042226 -
Pumo6g02167 244 SUPERFAMILY L30e-like 85 227 IPR029064 -
Pumo6g02167 244 SUPERFAMILY Translational machinery components 2 83 - -
Pumo6g02167 244 FunFam Peptide chain release factor subunit 1 86 244 - -
Pumo6g02167 244 Pfam eRF1 domain 3 88 225 IPR005142 -
Pumo6g02167 244 Gene3D - 86 244 IPR029064 -
Pumo6g02167 244 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 236 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02167 Pumo-Chr6 40044184 40044918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02167 1 244 Eukaryotic Initiation Factors Gene Family AT3G26618 92.213 5.82e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02167 K03265 - gmx:100786788 474.552