Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02166 ATGGCTGATGGTCAAGAATCAGACAAGAACATCGAGATATGGAAGATCAAGAAATTGATCAAGGCATTGGAAGCTGCTAGAGGTAATGGTACCAGCATGATTTCTCTGATTATGCCTCCACGCGATCAAATATCCCGGGTCACCAAAATGTTGGGAGATGAATTTGGAACTGCTTCAAACATCAAAAGTAGGGTGAACCGACAGTCTGTGTTGGGAGCCATTACGTCTGCTCAACAGAGGTTGAAACTATATAACAAGGTCCCTCCAAATGGTTTGGTTCTTTACACTGGAACAATCGTCACTGAAGATGGAAAGGAAAAGAAGGTGACAATTGATTTTGAACCTTTCAAGCCTATCAATGCATCACTATACCTCTGTGATAACAAGTTTCACACAGAAGCTCTAAATGAACTTTTAGAATCTGATGACAAGTTTGGTTTCATTGTGATGGATGGAAATGGCACCCTTTTTGGGACTTTGAGCTGGAAACACTCGTGA 498 0.4137 MADGQESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSWKHS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02166 165 Pfam eRF1 domain 1 18 138 IPR005140 -
Pumo6g02166 165 FunFam Eukaryotic peptide chain release factor subunit 1 2 135 - -
Pumo6g02166 165 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Pumo6g02166 165 Gene3D eRF1 domain 1 2 135 IPR024049 -
Pumo6g02166 165 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 4 161 IPR004403 GO:0003747|GO:0006415
Pumo6g02166 165 SMART eRF1_1_2 4 140 IPR005140 -
Pumo6g02166 165 Gene3D eRF1 domain 2 136 165 IPR042226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02166 Pumo-Chr6 40043604 40044101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02166 1 161 Eukaryotic Initiation Factors Gene Family AT5G47880 93.168 6.07e-109 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02166 K03265 - gmx:100813343 303.523