Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02158 ATGATAGACTATCTCTTAACTCAACAACGATCGCAACCTGAATATTACACTGATCAGATCATCAAAGGACTTGCTCTGACTATGCTACTTGCTGGAACAGACACATCAGCTGTAACTTTAGAATGGGCAATGTCTAATTTATTAAATCATATGGAAATATTGAAGAAGGCAAAAAATGAATTAGACACTCATATAGGACTAAATCGCCTAGTAGAAGAGCCTGATATTTCAAAACTCCCTTACCTTCAAAGCATTGTTTATGAGACACTTCGGCTGCATCCCGCTGCTCCGTTGTTGGTACCACATTTGTCTTCAGAAGATTGCACCATAGGAGAATATAATGTCCCACAAAACACAATTTTGTTAGTGAACGCCTGGGCTATTCATAGAGATCCCAAGTTGTGGAATGACCCTACGCACTTTAAGCCTGAGAGGTTTGAGAGAGACAATGAAGCAAACAAGTTACTTCCATTTGGATTAGGTAGGAGGGCTTGCCCTGGAGCAAACTTGGCTCAACGCACAGTGGGCTTAACTCTAGCCTTATTAATTCAATGTTTTGAGTGGAAACGGACAACTAAGGAAGAAATTGATATGACTGAAGGAAAAGGAGTTACTGTGTCAAAAAAATATCCCTTAGAAGCTATGTGCCAAGTGTGCCAATAA 663 0.3997 MIDYLLTQQRSQPEYYTDQIIKGLALTMLLAGTDTSAVTLEWAMSNLLNHMEILKKAKNELDTHIGLNRLVEEPDISKLPYLQSIVYETLRLHPAAPLLVPHLSSEDCTIGEYNVPQNTILLVNAWAIHRDPKLWNDPTHFKPERFERDNEANKLLPFGLGRRACPGANLAQRTVGLTLALLIQCFEWKRTTKEEIDMTEGKGVTVSKKYPLEAMCQVCQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02158 220 PANTHER CYTOCHROME P450 82C3-RELATED 1 217 - -
Pumo6g02158 220 PRINTS E-class P450 group I signature 40 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 PRINTS E-class P450 group I signature 83 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 PRINTS E-class P450 group I signature 20 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 PRINTS E-class P450 group I signature 124 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 PRINTS E-class P450 group I signature 155 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 PRINTS E-class P450 group I signature 165 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 PRINTS P450 superfamily signature 31 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 PRINTS P450 superfamily signature 156 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 PRINTS P450 superfamily signature 165 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 PRINTS P450 superfamily signature 84 95 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 Gene3D Cytochrome P450 1 217 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 Pfam Cytochrome P450 2 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 SUPERFAMILY Cytochrome P450 1 215 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02158 220 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 158 167 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02158 Pumo-Chr6 39653663 39655610 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02158 1 217 Cytochrome P450 AT5G36220 66.359 5.79e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02158 K13260 K24542 gmx:100811727 413.305