Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02138 ATGACTTTCTTTTATCTCTCCCTCATAGTTATCGTTCTTCTCTTTTCTCTAAAGCTCTTGTTCCAAACAAGAAGATTCAAGAACCTCCCTCCAGGACCACTTTCATTCCCCATAATCGGAAACCTCCACCAACTCAAACAACCCATCCACCGCACGTTCCACGCCATGTCACAGAACTACGGCCCCGTCTTCTCCCTCTGGTTCGGTTCCCGTTTCGTCGTCGTCGTTTCGACGCTCGCCGAGGTGCAGGAATGCTTCACCAAAAACGACGTCGTCTGGGCGAACCGGCCTCGCTTTCTCGCGGGCAAGTACATCGGGTACAACAACACCAGCGTGGCGTTCTCCCCCTACGGCGACCACTGGCGCAATCTCCGCCGCATCATGACGCTTGAGGTTCTCTCAACGCAGCGTTTAAACGCCTTCTTGGAAATCCGAAGGGACGAGATCATGAGGCTCGTGCAGAAGCTGGCTAAGGACTCCCGCGACGGCTTCACCAAAGTGGAACTTAAATCAAGGTTTTCGGAAATGACGTTTAACACTATAATGAGGATGGTGTCGGGGAAGAGGTACTATGGTGAAGACTGTGATGTGAGTGATGCGAAGGAAGCAAGGCAATTTAGAGAGATTATTAAGGAGTTGTTGACGTTGGGGGTTGGTGACCCTGGGGACTTCTTGGCTTTTTTGAGGTGGTTTGATTTCGATGGTTTGGAGAAAAGGCTAAAGAGGATAAGTGATAGAATCGATGCGTTCTTACAAGGACTCATTGATGAGCATCGTAATGGGAAGCATCGTGCTAATACTATGATAGACCATCTCCTAACTCAACAACGATCTCAACCTGAATACTACACGGATCAGATCATCAAAGGACTTGCTCTGGTTATACTACTTGCAGGAACAGACACATCAGCTGTAACTTTAGAATGGGCAATGTCTAATTTACTAAATCATCCAGAAATATTGAAGAAGGCAAAAAATGAATTAGACGCTTATATAGGACAGAGTCGCCTAGTAGATGAACCTGACATTCCAAAACTCCCTTACCTTCAAAATATTATTTTTGAGACACTTCGTTTGCATCCTGCTGCTCCATTATTGGTACCTCGTTCATCTTCAGAAGATTGCACCATAGGAGAATATAATGTCCCACAAAATACAATTTTGTTAGTGAATGCATGGGCTATTCATAGAGATCCCAAGCTTTGGAGTGACCCTACACATTTTAAGCCTGAGAGGTTTGAGAAGGAAAGTGAAACAAGCAAGTTACTTCCATTTGGGTTGGGGAGGAGAGCTTGCCCTGGAGCAAACTTGGCTCAACGCACAATGGGCTTAACTCTGGCCTTATTAATTCAATGTTTTGAGTGGAAACAGACTAATGAAGAAGAAATTGATATGACTGAAGGAGAAGGGATCACTATGTCAAAAAAAAATCCTTTAGAAGTTATGTGCCAAGTGTGCCAATCACCAGCAATTAAGCAGCAATTAAGAATGTTTTCTAATTGCTAG 1506 0.4475 MTFFYLSLIVIVLLFSLKLLFQTRRFKNLPPGPLSFPIIGNLHQLKQPIHRTFHAMSQNYGPVFSLWFGSRFVVVVSTLAEVQECFTKNDVVWANRPRFLAGKYIGYNNTSVAFSPYGDHWRNLRRIMTLEVLSTQRLNAFLEIRRDEIMRLVQKLAKDSRDGFTKVELKSRFSEMTFNTIMRMVSGKRYYGEDCDVSDAKEARQFREIIKELLTLGVGDPGDFLAFLRWFDFDGLEKRLKRISDRIDAFLQGLIDEHRNGKHRANTMIDHLLTQQRSQPEYYTDQIIKGLALVILLAGTDTSAVTLEWAMSNLLNHPEILKKAKNELDAYIGQSRLVDEPDIPKLPYLQNIIFETLRLHPAAPLLVPRSSSEDCTIGEYNVPQNTILLVNAWAIHRDPKLWSDPTHFKPERFEKESETSKLLPFGLGRRACPGANLAQRTMGLTLALLIQCFEWKQTNEEEIDMTEGEGITMSKKNPLEVMCQVCQSPAIKQQLRMFSNC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02138 501 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 FunFam Cytochrome P450 family protein 21 488 - -
Pumo6g02138 501 CDD CYP81 61 479 - -
Pumo6g02138 501 PANTHER CYTOCHROME P450 82C3-RELATED 9 484 - -
Pumo6g02138 501 Pfam Cytochrome P450 30 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 SUPERFAMILY Cytochrome P450 30 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02138 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Pumo6g02138 501 Gene3D Cytochrome P450 19 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02138 Pumo-Chr6 38912690 38917812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02138 9 485 Cytochrome P450 AT4G37370 55.717 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02138 K13260 - gmx:100811727 856.284