Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02115 ATGTTGGTTGACTCGCTATCCTTAAGAAGGGGGTCGGAAGCTGCCTTAGGTGATGAGGATGAACGGCACAGACAGACTATTGCTGTCGCTGAGTCCGTGCAGGTTGCCGATGCTAAGAGTGATGTCGTCGGATCTATTGGCAGCGTGTCTTGCGTTCGTGACGGAAGTGGGGGATGGAGGTGTGAAGGGGGTTCGAAGCACCAGTGCCATAGTTGCGGAAGATGTTTCGATCTTCAATCTTTAAACGAATTGGGCAGTCACGAAAGCATTTGTGAAGGTTTGGGTAACAATAGTAAAATCTTCGAATGCCCCTTCTATTCTAAGGTGTTTGGGTGTGGTCAAGCACTCAGTGGCCACAAGAGATCTCACCTCATGCCTTCTTCGTCCTCAACTACTAATGATTCTACTAGATTGAAAGAGAGCTTCATAGATCTCAAATTTCTAGCTCAGGCGAAATTGGGTAATATACCTTTGTGTTGGAATACTTTTATTGATTCTACTTGTATTTGCAAATTGGGTAATACCTTAACGATTGAAAATTGA 543 0.4457 MLVDSLSLRRGSEAALGDEDERHRQTIAVAESVQVADAKSDVVGSIGSVSCVRDGSGGWRCEGGSKHQCHSCGRCFDLQSLNELGSHESICEGLGNNSKIFECPFYSKVFGCGQALSGHKRSHLMPSSSSTTNDSTRLKESFIDLKFLAQAKLGNIPLCWNTFIDSTCICKLGNTLTIEN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02115 180 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 62 147 IPR044303 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02115 Pumo-Chr6 38343297 38348585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02115 60 160 C2H2 Transcription Factor Family AT3G60580 26.613 1.93e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02115 - - gmx:100815124 122.094