Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02108 ATGGCTACCAACACATTGATGAGTTCTGCTGTCTCAGCCTTCCCATCTCTCCTTTCTTCCACAAAATCCAGATTTGCCACTGCAGTTCCACTTTCCAGCTTCGCTACCAATGCCTCCTCTTCTCGCTTTTCCATGACTGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGATGGTTCAGCACCTGGTGACTTTGGATTCGACCCTCTACGTCTTGGTGAAGTACCGGAGAATCTTGAGAGGTTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCAGTTCCAGGGATTTTGGTTCCAGAGGCATTGGGCTTAGGCAATTGGGTAAAGGCTCAGGAATGGGCTGCAGTTCCTGGGGGCCAAGCAACCTACCTAGGCAACCCTGTTCCATGGGGCACCCTACCCACCATTCTGGCGATTGAATTCCTTGCTATTTCCTTTGTGGAGCACCAAAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAACCTTCCACGAATACAAAGTCAAAGAAATTAAGAATGGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTTCAACAATCAGCTTATCCCGGCACTGGACCTTTGGAGAACTTGGCAGCTCACTTGGCTGATCCATGGCACAACAACATTGGAAATATCATTATTCCCCAATCGATTTTGCCTTGA 738 0.4864 MATNTLMSSAVSAFPSLLSSTKSRFATAVPLSSFATNASSSRFSMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNIIIPQSILP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02108 245 Gene3D Chlorophyll a/b binding protein domain 50 236 - -
Pumo6g02108 245 Pfam Chlorophyll A-B binding protein 56 210 IPR022796 -
Pumo6g02108 245 FunFam Chlorophyll a-b binding protein, chloroplastic 50 236 - -
Pumo6g02108 245 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 237 IPR001344 GO:0009765|GO:0016020
Pumo6g02108 245 SUPERFAMILY Chlorophyll a-b binding protein 40 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02108 Pumo-Chr6 37804863 37807617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02108 1 197 Chloroplast and Mitochondria Gene Families AT3G54890 79.899 2.35e-107 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02108 K08907 - gmx:100305992 492.656