Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02103 ATGGAAAAGAACCTTACCGAGAATTCTGACAGTTTCGTTCACAAAGCCGAGGACATGAACACCGACGACACTACTCATTCGCCGGCGCCGGAGCCGGAGCCGGAGCCTGAAGATAAACTCGACGCCAAACCGGACGGCGAAACCGAAAAAGCTAAGGATTCAGATGACGTTCAGGGAGAGCAAGAACTCAAAGAGGAAGAGAAAAAGGAAGAAGAAACTGCGGAGGCGGAGGCTCCACCGGATTCTCCCCCTCCGAGCCTCGAGAAGGTTTCAGAAGACATTGACCAATTCCTCGTGACTTTGCAACACAATGCGGATGATGCCAACAAAGAAGCGACCACATTGGAGGTCCCTAATTTCGTCCCCATTTTTTTGCATCTCGTGGAAGAGAAAATAACGAAGTATGATACCAACGTGGCAAAATGGGGTGAGACTGCGGAAGAGGATTCGTCGTTTCTGGAGTGCGTGAATCGCATATCGAAGCTGATGAAACATTTCACAGAATACTCTCAGTCTCATTCCCAGGAAGAACAAGAGGACGAGGACAAGGACAAAGTCAAGGGCAAGACGGACCTCATGATCAACGGCATCGGCGCGATACAGCAGCGTGCGATGTCGTTTTTGGAGGAAGAGTTTCGGTCACTAATGGAAGAAGGTAGAAACCAGAACAAACCAGACCCGAAAGGGAAACAACACGTGGCAGAATCCTCCGAGCCTGAGTCACCTGCGGAAACGGTTACGGATTTCCCGGGTTTCGCGGAGGAAACGGTTACGAATCTGAGAAAAATAGCCAATGAAATGATAGCTGGCGGTTACGAAAACGAATGCTGCCAGGCTTACGCGCTTTCGCGAAGGCACGCGTTCGAAGATGGCATGCACAAGCGACTAGGGTACGAGAAACTAAGCATCGACGAGGTGCAGAGAATGCAGTGGGAAGCACTGGAGCGAGAAATCCCCACGTGGATCAACACGTGGAAGGAATGCACCACGGTGTGGCTCGCGGGGGAGCGGAGGCTCGCCGAATCAGTGTTCACCAAGGACACGGTGTTCTCGGCGAACCTATTTGGCGACCTCTCCCGCGGAATTACAATTCAGCTTCTCAATTTCGCGGAGAGCGTCGCAATGACGAAGCGCGCCGAGGAAAAGCTCTTCAAGCTCCTCGACATGTACGAAACCTTGAGGGACGTTATTCCGAACATGGAGAGCCTCTTTCCCGACGATGTCGTCGGGGAAGTCAAGGCCGAGACGTCGTCGGCTAAGTGCCGCCTCGGAGAGGCAGCAGTGTTGATATTCTGCGACCTGGAGAACTCGATCAAATCCGAAACCGGAAAAACTCCGGTTGCCGGTGGTGCCGTGCATCCTCTCACGCGCTACATCATGAACTACCTGAGGCTAGCGTGTGAATACAAAGACACCATGGAAGAAGTATTCAAAGAACACTCCAAAATCGAGCGTGCGGATTCAACAAGCAGGCCTCACTACGAGAGCGAGGAAAGCAAACCAAAGAACCAGAACAAACAGAAAGAGAACGTGTCACCTTTCGCGGCGCAGTTAATGAGGGTTATGGAGCTTCTGGACTCAAATCTGGCAGGGAAGGCGAAGCTGTACAAAGAAGTTGCACTAAGCTGCATTTTCATGATGAACAACGGGAGGTACATAGTTCAGAAGATAAAAGGCTCTGCTGAGATCTACGAAGTGATGGGGGAAACGTGGTGTCGTAAGAGATCGACAGAACTGAGGACTTACCATAAGAATTATCAGGTGGAAACATGGAGTAAGATTCTGAGTTATCTTAGCCCTAAGGGTTTGAGCGAGAACGGGAAGGTGCAGAAGCCGGTGCTGAAGGAGCGGTTCAAGAGCTTCAACGCGGCGTTTGAGGAGATTCACAAGACGCAGAGCGTGTGGGTGGTGAGTGACGAACAGCTTCAATCGGAACTTAGGGTTTCTATTTCTGCACTAGTGATTCCTGCGTACAGGTCCTTTTTGGGAAGGTTTTCGCAGTATTTGGATCCAGGGAGACAAACTGAAAAGTATATTAAGTACCAAGCTGAAGATGTAGAGACTTACATTGATGAGTTGTTTGATGGCAATCCTCACGGGCGCCGCTAG 2109 0.5069 MEKNLTENSDSFVHKAEDMNTDDTTHSPAPEPEPEPEDKLDAKPDGETEKAKDSDDVQGEQELKEEEKKEEETAEAEAPPDSPPPSLEKVSEDIDQFLVTLQHNADDANKEATTLEVPNFVPIFLHLVEEKITKYDTNVAKWGETAEEDSSFLECVNRISKLMKHFTEYSQSHSQEEQEDEDKDKVKGKTDLMINGIGAIQQRAMSFLEEEFRSLMEEGRNQNKPDPKGKQHVAESSEPESPAETVTDFPGFAEETVTNLRKIANEMIAGGYENECCQAYALSRRHAFEDGMHKRLGYEKLSIDEVQRMQWEALEREIPTWINTWKECTTVWLAGERRLAESVFTKDTVFSANLFGDLSRGITIQLLNFAESVAMTKRAEEKLFKLLDMYETLRDVIPNMESLFPDDVVGEVKAETSSAKCRLGEAAVLIFCDLENSIKSETGKTPVAGGAVHPLTRYIMNYLRLACEYKDTMEEVFKEHSKIERADSTSRPHYESEESKPKNQNKQKENVSPFAAQLMRVMELLDSNLAGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYEVMGETWCRKRSTELRTYHKNYQVETWSKILSYLSPKGLSENGKVQKPVLKERFKSFNAAFEEIHKTQSVWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKYQAEDVETYIDELFDGNPHGRR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02103 702 MobiDBLite consensus disorder prediction 480 505 - -
Pumo6g02103 702 Pfam Exo70 exocyst complex subunit 321 692 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo6g02103 702 MobiDBLite consensus disorder prediction 218 237 - -
Pumo6g02103 702 Gene3D Exocyst complex component Exo70 132 702 - -
Pumo6g02103 702 Coils Coil 57 77 - -
Pumo6g02103 702 MobiDBLite consensus disorder prediction 1 93 - -
Pumo6g02103 702 SUPERFAMILY Cullin repeat-like 143 695 IPR016159 -
Pumo6g02103 702 MobiDBLite consensus disorder prediction 1 76 - -
Pumo6g02103 702 PANTHER EXOCYST COMPLEX PROTEIN EXO70 116 696 IPR004140 GO:0000145|GO:0006887
Pumo6g02103 702 MobiDBLite consensus disorder prediction 480 509 - -
Pumo6g02103 702 MobiDBLite consensus disorder prediction 218 251 - -
Pumo6g02103 702 FunFam Exocyst subunit Exo70 family protein 136 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02103 Pumo-Chr6 37574133 37576241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02103 56 697 EXO70 exocyst subunit family AT5G13990 49.777 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02103 K07195 - gmx:100819960 1051.97