Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02089 ATGGAAGGAGGAGGAGCTGCTCCGCCGGCCGACACCGTGATGTCCGACGCAGCGCCGCCGCAGCAGCCGCCGGTGGCGATGGGGATCGAGAATATTCCGGCGACGCTGAGCCACGGTGGCAGGTTCATCCAATACAACATATTCGGTAACATATTCGAAGTCACCGCCAAATACAAGCCACCCATCATGCCCATCGGAAAAGGCGCATACGGCATCGTTTGCTCGGCTTTGAATTCGGAGACGAACGAGCACGTTGCCATTAAGAAGATTGCGAATGCGTTTGACAACAAGATTGACGCCAAGAGGACCCTCCGTGAAATCAAGCTGCTTCGTCACATGGATCATGAAAACGTGGTTGCAATCAGGGATATAGTGCCACCACCTCAAAGGGAAATATTCAATGATGTTTACATTGCATATGAGTTGATGGACACTGACCTTCACCAAATCATTCGTTCAAATCAAGCATTATCAGAGGAGCACTGTCAGTATTTTCTGTATCAAATCCTCCGTGGGTTGAAGTACATACATTCTGCCAATGTTCTGCATAGGGACTTAAAACCTAGCAACCTTCTCCTGAATGCTAACTGCGACTTAAAAATTTGTGATTTTGGACTGGCTCGTGTCACCTCTGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTGAACTCTTCTGATTACACTGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAACTGATGGATCGAAAGCCTTTGTTTCCTGGCAGAGATCATGTGCATCAGTTGCGTCTACTTATGGAGGTAACTTATTTAGAAGTCTTCATTATTTGA 852 0.4624 MEGGGAAPPADTVMSDAAPPQQPPVAMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREIFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMEVTYLEVFII 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02089 283 Gene3D Phosphorylase Kinase; domain 1 35 158 - -
Pumo6g02089 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Pumo6g02089 283 SMART serkin_6 59 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02089 283 MobiDBLite consensus disorder prediction 1 26 - -
Pumo6g02089 283 ProSitePatterns MAP kinase signature. 94 197 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pumo6g02089 283 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 57 276 - -
Pumo6g02089 283 FunFam Mitogen-activated protein kinase 44 153 - -
Pumo6g02089 283 Gene3D Transferase(Phosphotransferase) domain 1 159 279 - -
Pumo6g02089 283 ProSitePatterns Protein kinases ATP-binding region signature. 65 89 IPR017441 GO:0005524
Pumo6g02089 283 SUPERFAMILY Protein kinase-like (PK-like) 64 275 IPR011009 -
Pumo6g02089 283 FunFam Mitogen-activated protein kinase 143 278 - -
Pumo6g02089 283 ProSiteProfiles Protein kinase domain profile. 59 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02089 283 Pfam Protein kinase domain 64 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02089 Pumo-Chr6 36853962 36860416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02089 1 275 MAP Kinase Gene Family AT2G43790 89.362 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pumo6g02089 Pkinase 2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02089 K14512 - gmx:100805830 555.058