Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02041 ATGGAAGCCTCTAACTCACATTCGTTTCTCTCTCATGTGCACCTTTTCGTGCTTTTCTTGTTATGCTTTGTGGTCACAATTGAAGCTTCAAAGAAGAAGGTCTCGGCCTTGTATGTGTTTGGAGACTCCACGGTAGACCCTGGAAACAACAACTTCGTAGAAACGGCTTTCAGGAGCGATTTTCCACCCTACGGTAGAGACTTTGTTCACCAAGCTCCCACGGGAAGGTTCACCAATGGAAAGCTTAGCACCGATTTTCTTGCTTCATATTTAGGCCTAAAAGAGTTGTTGCCACCATATTTGGACCCAAATCTCAGTGACAAGGAACTTGTAACGGGTGTCAGTTTCGCCTCTGCTGGTTCTGGCTTTGACCCACTCACTCCAATGCTGGGAAATGTAATTCCAATACCAAAGCAGTTGGAATATTTCAAAGAATACAAAAAGAGGTTAGAGGGTATGCTTGGTAAGAAAAGAACCGAATATCATATAAACAATGCTTTATTTTTCATCAGCGCGGGCACAAATGACTACGTCATTAATTATTTTTCGGTGCCAATACGAAGAAAAACCTACACCACCCACTTAACCTACGGACAGTTCTTGCTCCAACATGTAAAAGATTTCATTCAGAATTTATGGAGAGAAGGTGCACGAAAAATAGGTTTGGTTGGAGTACCTCCAATGGGATGCTTGCCGATCATGATCACCTTCAATTCCCATAATGTCTTTCTTGAACGTGGTTGTGTAGACAAGTATTCAGCTGTTGCAAGAGATCACAATATGATGCTTCAAAATGAATTGTTCTTAATGCAACTAAATTTCTCTAATATCCCTGCCGGTGCTAAAATCTATTACCTCGACATATATGGACCCTTGGACGACATGATTCAAGAGCATCAAAATCTAGGTTTTGATGAGGTTGATCGTGGTTGTTGTGGGAGTGGTTACATCGAAGCAACTTTTTTGTGTAATGAGGTTTCGTATGTGTGCTCTGATCCATCAAAGTTTGTCTTTTGGGATTCAATACACCCTACGGAGAAGGCATACTATGACCTATTTATGGCAGCCCGTCCCAAAATTGATGCCCTTATCAATGGCTAG 1101 0.4169 MEASNSHSFLSHVHLFVLFLLCFVVTIEASKKKVSALYVFGDSTVDPGNNNFVETAFRSDFPPYGRDFVHQAPTGRFTNGKLSTDFLASYLGLKELLPPYLDPNLSDKELVTGVSFASAGSGFDPLTPMLGNVIPIPKQLEYFKEYKKRLEGMLGKKRTEYHINNALFFISAGTNDYVINYFSVPIRRKTYTTHLTYGQFLLQHVKDFIQNLWREGARKIGLVGVPPMGCLPIMITFNSHNVFLERGCVDKYSAVARDHNMMLQNELFLMQLNFSNIPAGAKIYYLDIYGPLDDMIQEHQNLGFDEVDRGCCGSGYIEATFLCNEVSYVCSDPSKFVFWDSIHPTEKAYYDLFMAARPKIDALING 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02041 366 Gene3D SGNH hydrolase 24 357 IPR036514 -
Pumo6g02041 366 PANTHER GDSL ESTERASE/LIPASE EXL3 20 350 - -
Pumo6g02041 366 Pfam GDSL-like Lipase/Acylhydrolase 37 350 IPR001087 GO:0016788
Pumo6g02041 366 CDD SGNH_plant_lipase_like 36 349 IPR035669 -
Pumo6g02041 366 SUPERFAMILY SGNH hydrolase 163 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02041 Pumo-Chr6 34502363 34506952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02041 11 349 Pollen Coat Proteome AT1G75910 34.203 1.11e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02041 - - gmx:100779250 669.463