Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02034 ATGAAGAAGGTTCCCAAGAACAGCTGCAAGTCTGCATCACACAGGCTCTTTAAGGACAAGGCAAAGAACCGTGTGGATGACTTGCAGCTGATGTTCCTGGATCTGCAGTTTGCTAGGAAGGAGAGCCGCACTGTCGATGCTGCGGTGCTTGAGGAACAAGTCCATCAAATGCTTCGCGAGTGGAAGGCCGAGCTCAACGAGCCCTCGCCTGCTTCTTCGTTGCAGCAAGGTGGCAGTCTTGGATCATTCTCCACCGACATCTGTCGGCTATTGCAGCTTTGTGAGGAGGAAGATGATGCCTCTAGTCCGTTAGCAGCTCCTAAGCCTGAACCTAATGATCAGACTCTGCAGGCTGGGGGTAAGGTCATGTTCCAAGAGGGCCAACAGCAACATGATTTCCCATTGGTTGATGAGTGCAAACACTCCACCTCAAGTGTTCAAAATGTGGCAGCTAACAACCCGGATGGGCATGCTTTAGAATATCATCAGTTTGATTTGCAACAGGACTATGATCACGGCTTTTATACTGGTTTTAATGGTACAGGTTATTGTGAGGAGGATGCTATTCCTCATATATCTAGCTACCTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGCGCAAGGGTTGGACTGGTGTCAAGACTATTGTAGTAGCTTTCATGCTGCCCTAGCTTTGAATGAAGGGCCACCAGGCATGGCCCCTGTTCTACGACCTGGGGGCATTGGTTTGAAGGATAATTTACTTTTTGCTGCCCTTAGTGCAAAGGCACAAGGAAAGGATGTTGGCATCCCAGAATGTGAGGGAGCTGCAACTGCAAAGTCTCCATGGAATGCGCCTGAGCTCTTTGATCTGTCTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTCTTCTTTGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAAAGGTCATTGCCGGATTATAGTGGACGTGGTTGGCATGAATCCAGAAAGCAAGTGATGAATGAATTTGGAGGGCTGAAGAGATCCTATTATATGGATCCACAACCACTGAACCATTTTGAGTGGCACCTTTATGAATATGAGATTAGCAAGTGTGATGCATGTGCCTTGTACCGATTGGAACTGAAGCTTGTTGATGGTAAGAAGAACTCCAAGACAAAGGTAGCAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCTGAGTTTCCCCATGACAACAAAAGGGCTGCCAAAGGCAGAGCCAAAATTAATGCCAAAGTCGGCATTGGTGGTGTCTATTCAGCTTCACACAGAGTGGCTCCACTGAATGGAACATACGAGTATGGTTTAGCTGCACCATATGACTATCTTGTTGACAACATGGGTGACTACTATGGGACATGA 1434 0.4763 MKKVPKNSCKSASHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDQTLQAGGKVMFQEGQQQHDFPLVDECKHSTSSVQNVAANNPDGHALEYHQFDLQQDYDHGFYTGFNGTGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKTKVANDSVADLQKQMGRLSAEFPHDNKRAAKGRAKINAKVGIGGVYSASHRVAPLNGTYEYGLAAPYDYLVDNMGDYYGT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02034 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 472 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02034 Pumo-Chr6 34344226 34349837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02034 3 475 VOZ-9 Transcription Factor Family AT1G28520 71.487 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Pumo6g02034 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02034 - - gmx:100798565 963.755