Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02030 ATGGGGGAGGAGATACTGAATGATGCGTTGAGGAGTATGGTGAATGCAGAGAAGAGAGGGAAAATTATGGTGGAACTCAAGCCAATCTCCACTATTATGTCTTCCTTTCTCCGCATCATGAAATACCATGAGTATATCAAGGACTTTCAAGTCTATGATCCGTAG 165 0.4242 MGEEILNDALRSMVNAEKRGKIMVELKPISTIMSSFLRIMKYHEYIKDFQVYDP 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02030 54 Pfam Ribosomal protein S8 5 51 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo6g02030 54 PANTHER 40S RIBOSOMAL PROTEIN S15A 4 53 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo6g02030 54 SUPERFAMILY Ribosomal protein S8 4 53 IPR035987 GO:0003735|GO:0005840|GO:0006412
Pumo6g02030 54 Gene3D - 2 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02030 Pumo-Chr6 34210333 34210497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02030 1 54 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 77.778 5.66e-26 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02030 K02957 - gmx:100306361 95.9005