Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02029 ATGATTGAACTACAAGGTAGGATTAACGATTGCAAGGCCGTTAGGTACCGAAAGGACCTTAACGCAAGGGATATTGAAACCTACAGATTGCAGGCTTTTGCAACACATCAGTGGGGTTGTGTTGTGATTACCACTACTGATGGAATTCTAGATCATGAAGAGGCGATTAAAAGGAATGTAGGTGGCCATGTTCTTGGTTATTTTCTTTAA 210 0.4095 MIELQGRINDCKAVRYRKDLNARDIETYRLQAFATHQWGCVVITTTDGILDHEEAIKRNVGGHVLGYFL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02029 69 Pfam Ribosomal protein S8 5 67 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo6g02029 69 Gene3D - 9 69 - -
Pumo6g02029 69 SUPERFAMILY Ribosomal protein S8 2 68 IPR035987 GO:0003735|GO:0005840|GO:0006412
Pumo6g02029 69 ProSitePatterns Ribosomal protein S8 signature. 39 56 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo6g02029 69 PANTHER 40S RIBOSOMAL PROTEIN S15A 2 68 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02029 Pumo-Chr6 34210110 34210319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02029 2 68 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 67.164 9.72e-31 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02029 K02957 - gmx:100792186 115.161