Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02023 ATGAGAAGAGGATTGATGATATATTCAACAAGTTTGACCCTGTCATTGAAAGGGTTATCAAGAAGCGCCGAGAGATCGTGCAGAAGGAGAAAGAACGGAGAAGTTGTCGAGGGTGAGGCCAGTGGGGTTTTCCTCGATACTTTGCTTGAATTCGCTGAGGACGAGACCATGGAGATCAAAATCACCAAGGAGCAAATCAAGGGTCTTGTTGTCGACTTCTTCTCAGCAGGGACAGATTCAACAGCCGTGGCAACAGAGTGGGCTTTGGCAGAGCTCATCAACAATCCTAGAGTTTTGCAAAAGGCTCGGGATGAGGTCTACAGTGTTGTGGGAAAAGATAGACTTGTTGACGAAGTTGATACTCAAAACCTTCCTTACATTAGAGCCATTGTGAAGGAGACATTCCGTATGCACCCACCACTCCCTGTGGTCAAAAGAAAGTGTGTGGAAGAATGTGAGGTTAACGGCTTTGTGATCCCTGAGGGAGCTTTGATTCTTTTCAATGTTTGGGCTGTAGGAAGAGACCCAAAATACTGGGACAGACCATTGGAATTTCGTCCAGAGAGGTTCTTAGAAACTGGTGTTGAAGGGGAAGTGGGACCTATTGATCTTAGGGGCCAACATTTCCAACTTCTCCCATTTGGATCTGGAAGGAGAATGTGCCCTGGAGTGAATTTGGCTACTTCAGGAATGGCAACACTGCTTGCATCTCTTATCCAGTGCTTTGACCTGCAAGTAGTGGGCCCAAAAGGAGAAATATTGAAAGGTAAAGACGCCAAAGTGAGCATGGAAGAGAGTGCTGGCCTCACCGTTCCAAGGGCACATAATCTCAGGTGTGTTCCACTTGCAAGGACAAGCGTTGCAGCTAAACTCCTTTCTTGA 882 0.4671 MRRGLMIYSTSLTLSLKGLSRSAERSCRRRKNGEVVEGEASGVFLDTLLEFAEDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWALAELINNPRVLQKARDEVYSVVGKDRLVDEVDTQNLPYIRAIVKETFRMHPPLPVVKRKCVEECEVNGFVIPEGALILFNVWAVGRDPKYWDRPLEFRPERFLETGVEGEVGPIDLRGQHFQLLPFGSGRRMCPGVNLATSGMATLLASLIQCFDLQVVGPKGEILKGKDAKVSMEESAGLTVPRAHNLRCVPLARTSVAAKLLS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02023 293 PANTHER CYTOCHROME P450 98A9 28 285 - -
Pumo6g02023 293 Pfam Cytochrome P450 44 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 Gene3D Cytochrome P450 16 270 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 SUPERFAMILY Cytochrome P450 41 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 PRINTS P450 superfamily signature 221 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 PRINTS P450 superfamily signature 76 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 PRINTS P450 superfamily signature 212 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 PRINTS P450 superfamily signature 129 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 214 223 IPR017972 GO:0005506|GO:0016705
Pumo6g02023 293 PRINTS E-class P450 group I signature 128 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 PRINTS E-class P450 group I signature 221 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 PRINTS E-class P450 group I signature 211 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 PRINTS E-class P450 group I signature 168 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 PRINTS E-class P450 group I signature 85 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo6g02023 293 PRINTS E-class P450 group I signature 65 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02023 Pumo-Chr6 34035220 34036685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02023 37 285 Cytochrome P450 AT5G47990 45.382 2.86e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02023 - K24188 gmx:100037450 496.508