Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02019 ATGTGGCATTCCTCGAAAAAATGGTTCACTGAGGATGAGGAACTCACACTGTATGAGAGTGCAACTGGGGAGAGTTTCTGGGACTTTCTCAACAAAACCACTGAATCTGACACTCTGGGCATGTTTCAAGATGCCATGGCTGCAGACTCTAACATGTTCAAACTTGCACTCACAGAATGCAAGCATGTGTTCGAGGGACTGGGTTCCCTTGTCGATGTGGGAGGTGGGACTGGTGTCGTCACAAGGCTCATCAGTGAAGCCTTCCCTCACTTGAAATGCACAGTGTTTGACCAACCACAGGTTGTGGCTAACTTGACTGGAACCGAAAATTTGAACTTTGTTGGTGGTGATATGTTCAAGTCCATCCCCTCAGCTGATGCAGTTTTACTCAAGTGGGTTTTGCACGATTGGAACGATGAGCTCTCTGTGAAGATATTGAAGAACTGCAAAGAAGCTATTTCAGAGAAAGGAAAAGAAGGAAAGGTGATAATCATAGACATAGCAATTGATGAAGCAGGTGATGATCGTGAAATGACTGAGTTGAAGCTGGACTATGACTTGGTGATGCTGACTATGTTCAATGGAAAAGAAAGAGAAAAGAAAGAGTGGGAGAAACTCATATACGAGGCAGGCTTCAGCAGTTACAAGATTACTCCTATATGTGGCTTCAAATCTCTTATCGAAGTTTATCCTTAA 696 0.4368 MWHSSKKWFTEDEELTLYESATGESFWDFLNKTTESDTLGMFQDAMAADSNMFKLALTECKHVFEGLGSLVDVGGGTGVVTRLISEAFPHLKCTVFDQPQVVANLTGTENLNFVGGDMFKSIPSADAVLLKWVLHDWNDELSVKILKNCKEAISEKGKEGKVIIIDIAIDEAGDDREMTELKLDYDLVMLTMFNGKEREKKEWEKLIYEAGFSSYKITPICGFKSLIEVYP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02019 231 Gene3D Vaccinia Virus protein VP39 1 231 IPR029063 -
Pumo6g02019 231 FunFam O-methyltransferase ZRP4 1 231 - -
Pumo6g02019 231 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 231 IPR016461 GO:0008168
Pumo6g02019 231 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 230 IPR029063 -
Pumo6g02019 231 PANTHER O-METHYLTRANSFERASE 5 216 IPR016461 GO:0008168
Pumo6g02019 231 Pfam O-methyltransferase domain 2 213 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02019 Pumo-Chr6 33948002 33970675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02019 41 218 Monolignol Biosynthesis Gene Families AT5G54160 39.665 5.28e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02019 K22588 - gmx:100807589 429.098