Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02018 ATGGGTTTCGGTAGCAATATTGGCAGTGAAGAGAGCGAAATGTATCACGCTCAAATCCATTTGTACAAACACGTGTACAACTTCGTGAGCTCCATGGCTCTAAAGTCCGCTATGGAATTAGGCATAGCAGACGTAATCCATACCCACGGAAAACCCATGACCCTTTCTGAGTTATCTTCAGAGCTGAAACTGCACCCCTCTAAAGTTGGTGTTCTCCACCGCTTTCTCCGCCTTCTAACGCACAACGGGTTCTTCGCGAAAACAACAGTGCAGTCACAGAAGGGTGGAGAAGGAGAAGAAGAGACAGCGTACGCTCTCACTCCTCCTTCGAAGCTTCTAATCAGAAGCAAGACAACGTGTTTGGCGCCTATTGTCAAGGGAGCGCTTCACTCGAGCTCCCTTGACATGTGGCACTCTTCCAAGAAGTGGTTCACTGAGGACAAGGAACTCACGCTCTATGAGAGTGCAACTGGGGAGAGTTTCTGGGACTTTCTCAACAAAACCACTGAATCTGACACGCTGAACATGTTTCAAGATGCCATGGCTGCAGACTCTAACATGTTCAAACTTGCACTCAAAGAATGCAAGCATGTGTTCGAGGGACTGGGTTCCCTTGTCGATGTGGGAGGCGGGACTGGTGCGGTCGCGAGGCTCATCAATGAAGCCTTCCCTCACTTGAAATGCACAGTGTTTGACCAGCCACAGGTTGTTGCTAACTTGATTGGAACCGAAAACTTGAACTTTGTTGGTGGTGATATGTTCAAGTCCATTCCCTCAGCCGATGCAGTTTTACTCAAGTGGGTTCTGCATGATTGGAACGACGAGCTCTCCGTGAAGATATTGGAGAACTGCAAAGAAGCTATTTCAGGGAAAGGGAAAGAAGGAAAGGTGATAATCATAGAAATAGCAATTGATGAAACAAGTGATGATCGCGAATTGACTGAGTTGAAATTGGACTATGACTTAGTAATGCTTTCTATGTTCAATGGAAAAGAGAGAGAAAAGAAAGAGTGGGAGAAAATCATATTCGAGGCAGGCTTCAGTAGCTACAAGATTACTCCTATATGTGGCTTCAAATCTCTCATCGAAGTTTATCCTTAA 1101 0.4587 MGFGSNIGSEESEMYHAQIHLYKHVYNFVSSMALKSAMELGIADVIHTHGKPMTLSELSSELKLHPSKVGVLHRFLRLLTHNGFFAKTTVQSQKGGEGEEETAYALTPPSKLLIRSKTTCLAPIVKGALHSSSLDMWHSSKKWFTEDKELTLYESATGESFWDFLNKTTESDTLNMFQDAMAADSNMFKLALKECKHVFEGLGSLVDVGGGTGAVARLINEAFPHLKCTVFDQPQVVANLIGTENLNFVGGDMFKSIPSADAVLLKWVLHDWNDELSVKILENCKEAISGKGKEGKVIIIEIAIDETSDDRELTELKLDYDLVMLSMFNGKEREKKEWEKIIFEAGFSSYKITPICGFKSLIEVYP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02018 366 Gene3D - 9 113 IPR036388 -
Pumo6g02018 366 FunFam O-methyltransferase ZRP4 116 366 - -
Pumo6g02018 366 SUPERFAMILY "Winged helix" DNA-binding domain 11 116 IPR036390 -
Pumo6g02018 366 FunFam Coniferyl alcohol 9-O-methyltransferase 5 113 - -
Pumo6g02018 366 CDD AdoMet_MTases 205 304 - -
Pumo6g02018 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 365 IPR029063 -
Pumo6g02018 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 366 IPR016461 GO:0008168
Pumo6g02018 366 Gene3D Vaccinia Virus protein VP39 114 366 IPR029063 -
Pumo6g02018 366 PIRSF O-mtase 4 366 IPR016461 GO:0008168
Pumo6g02018 366 PANTHER O-METHYLTRANSFERASE 13 351 IPR016461 GO:0008168
Pumo6g02018 366 Pfam O-methyltransferase domain 137 348 IPR001077 GO:0008171
Pumo6g02018 366 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02018 Pumo-Chr6 33935298 33937181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02018 29 353 Monolignol Biosynthesis Gene Families AT5G54160 33.537 6.91e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02018 K22588 - gmx:106795493 625.935