Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02016 ATGAACAATGATTTTGATTTCTTGAGTATTTTTCAGGAGTCTATGGCGGCTGATTCTCAAATGTTCAAGCCGGGCCTCAAAGAATGCAAGCATGTGTTCGAGGGATTGGGTTCCCTTGTCGATGTGGGAGGTGGAACTGGTGTCGTCACAAGGCTCATCAGTGAAGCCTTCCCTCACTTGAAATGCACAGTGTTTGATCAACCACATGTCGTGGCCAACTTGACAGGAAACGAAAATTTGAACTTTGTTGGTGGAGATATGTTCAAGTCCATCCCTTCTGCTGATGCAGTTTTACTCAAGTGGGTTCTGCATGATTGGAACGATGAACTCTCCATAAAGATATTGAAGAAATGCAAAGAAGCTATTTCTGGGAAAGGGAAGAAAGGAAAGGTGATAATTATAGACATAGTAATTGATGAAGCAGGTGATGATCGCGAATTGACTGAGTTGAAGCTGGATTATGACTTGGTGATGCTGACTATGTTCAATGGAAAAGAAAGAGAAAAGAAAGAATGGGAGAAACTCATATATGATGCTGGCTTTAGTAGCTACAAGATTACTCCTGTTTTTGGCTTCAAATCTCTCATCGAAGTTTATCCTTAA 603 0.4096 MNNDFDFLSIFQESMAADSQMFKPGLKECKHVFEGLGSLVDVGGGTGVVTRLISEAFPHLKCTVFDQPHVVANLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDELSIKILKKCKEAISGKGKKGKVIIIDIVIDEAGDDRELTELKLDYDLVMLTMFNGKEREKKEWEKLIYDAGFSSYKITPVFGFKSLIEVYP 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02016 200 PANTHER O-METHYLTRANSFERASE 7 185 IPR016461 GO:0008168
Pumo6g02016 200 Pfam O-methyltransferase domain 4 182 IPR001077 GO:0008171
Pumo6g02016 200 Gene3D Vaccinia Virus protein VP39 1 200 IPR029063 -
Pumo6g02016 200 FunFam O-methyltransferase ZRP4 1 200 - -
Pumo6g02016 200 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 199 IPR029063 -
Pumo6g02016 200 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 200 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02016 Pumo-Chr6 33508517 33509659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02016 1 200 Monolignol Biosynthesis Gene Families AT1G51990 37.745 1.84e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02016 K22588 - gmx:106795493 323.168