Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02002 ATGAACCATGGCAGCTACATTGCTTATGAAGTGGTCATGGTTACTCTATCCATATCCCTCTTCGTTCTTGCTGTTGTTCTCTACCTTGTGATGAAGAAGAAGCCGGATGAGTCTGAAGAAACACTAGCTGTGAAGAAACACTGTGCTCGCGCATACTCATTGATGGACATTGATGCTGCCACTGATGGCTTCAACCATAGCAGAATTGTGGGGAAGGGCCGTGTGGGAACCGTGTATGCAGGGGTGCAAGAGAATGGAGAACTTGTAGCTGTGAAAAGGATTCATTCTGTTATTGTGTTGAGCAATGCAGGGTTTGGATTCTCATCGGTTTTAAAATGGCTCTCTTCAGCTCAACACCCTAACATAGTTCCTATAATTGGATTCTCAGAGGCACCGGGTGAGAGGATCATAGTGATGGAGTTCGGGCGCATGGTGAGTTTGGACTTCTATTTGCACCAAAACGTTAATGGGGCTTCACTTTTGGATTGGAACAAGAGGATCAGAATCGCGGCGGGAGTGGCAAGAGGGCTTCAGTACCTGCATGAAGTGGCAGCACCAAACATTGTGCATGGCTGTGTCAAGTCCTCAAATGTTTTGATTGATGTCAACTTTTGTCCTATGATTTGTGATTATGGTCTCAATTTCTTGGCACCATGGGAAAAGAGAGGGCTAGTGGGTTATGTGGATGATGAGTATTGGAATGAGGGAGGGGGTGGTGGTGCTAGCAAGGAAAGTGATGTTTATGGGTTGGGGGTGGTCATGCTTGAGCTATTGAGTGGTAGAGGGTGTGAGGAAGGATTGATAGCAAAGTGGGCATTGCCTTTGATCAAGGAAATGAGTTTTAGTGAACTTTTGGATGCTAGGTTGGTGATTCCTTCTGACATCAAGCCTCTAGTTAGACTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGGATGTGTAGGCCTTCCATGGCTCAGGTGACAACTATTTTGAACAATTTAGAGATGGAAGTGAGCATCTGA 1008 0.4554 MNHGSYIAYEVVMVTLSISLFVLAVVLYLVMKKKPDESEETLAVKKHCARAYSLMDIDAATDGFNHSRIVGKGRVGTVYAGVQENGELVAVKRIHSVIVLSNAGFGFSSVLKWLSSAQHPNIVPIIGFSEAPGERIIVMEFGRMVSLDFYLHQNVNGASLLDWNKRIRIAAGVARGLQYLHEVAAPNIVHGCVKSSNVLIDVNFCPMICDYGLNFLAPWEKRGLVGYVDDEYWNEGGGGGASKESDVYGLGVVMLELLSGRGCEEGLIAKWALPLIKEMSFSELLDARLVIPSDIKPLVRLAKVASACVGNSRMCRPSMAQVTTILNNLEMEVSI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02002 335 PIRSF ILK 31 334 - -
Pumo6g02002 335 SUPERFAMILY Protein kinase-like (PK-like) 46 326 IPR011009 -
Pumo6g02002 335 FunFam serine/threonine-protein kinase-like protein ACR4 30 141 - -
Pumo6g02002 335 FunFam Receptor protein kinase CRINKLY4 143 333 - -
Pumo6g02002 335 Gene3D Transferase(Phosphotransferase) domain 1 144 334 - -
Pumo6g02002 335 Pfam Protein kinase domain 65 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02002 335 Gene3D Phosphorylase Kinase; domain 1 25 141 - -
Pumo6g02002 335 ProSiteProfiles Protein kinase domain profile. 64 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g02002 335 PANTHER OS01G0253100 PROTEIN 39 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02002 Pumo-Chr6 33184007 33185810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02002 32 326 Receptor kinase-like Gene Family AT3G59420 40.000 3.54e-54 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pumo6g02002 Pkinase 3.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02002 - - gmx:100809726 606.675