Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo6g02002 | ATGAACCATGGCAGCTACATTGCTTATGAAGTGGTCATGGTTACTCTATCCATATCCCTCTTCGTTCTTGCTGTTGTTCTCTACCTTGTGATGAAGAAGAAGCCGGATGAGTCTGAAGAAACACTAGCTGTGAAGAAACACTGTGCTCGCGCATACTCATTGATGGACATTGATGCTGCCACTGATGGCTTCAACCATAGCAGAATTGTGGGGAAGGGCCGTGTGGGAACCGTGTATGCAGGGGTGCAAGAGAATGGAGAACTTGTAGCTGTGAAAAGGATTCATTCTGTTATTGTGTTGAGCAATGCAGGGTTTGGATTCTCATCGGTTTTAAAATGGCTCTCTTCAGCTCAACACCCTAACATAGTTCCTATAATTGGATTCTCAGAGGCACCGGGTGAGAGGATCATAGTGATGGAGTTCGGGCGCATGGTGAGTTTGGACTTCTATTTGCACCAAAACGTTAATGGGGCTTCACTTTTGGATTGGAACAAGAGGATCAGAATCGCGGCGGGAGTGGCAAGAGGGCTTCAGTACCTGCATGAAGTGGCAGCACCAAACATTGTGCATGGCTGTGTCAAGTCCTCAAATGTTTTGATTGATGTCAACTTTTGTCCTATGATTTGTGATTATGGTCTCAATTTCTTGGCACCATGGGAAAAGAGAGGGCTAGTGGGTTATGTGGATGATGAGTATTGGAATGAGGGAGGGGGTGGTGGTGCTAGCAAGGAAAGTGATGTTTATGGGTTGGGGGTGGTCATGCTTGAGCTATTGAGTGGTAGAGGGTGTGAGGAAGGATTGATAGCAAAGTGGGCATTGCCTTTGATCAAGGAAATGAGTTTTAGTGAACTTTTGGATGCTAGGTTGGTGATTCCTTCTGACATCAAGCCTCTAGTTAGACTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGGATGTGTAGGCCTTCCATGGCTCAGGTGACAACTATTTTGAACAATTTAGAGATGGAAGTGAGCATCTGA | 1008 | 0.4554 | MNHGSYIAYEVVMVTLSISLFVLAVVLYLVMKKKPDESEETLAVKKHCARAYSLMDIDAATDGFNHSRIVGKGRVGTVYAGVQENGELVAVKRIHSVIVLSNAGFGFSSVLKWLSSAQHPNIVPIIGFSEAPGERIIVMEFGRMVSLDFYLHQNVNGASLLDWNKRIRIAAGVARGLQYLHEVAAPNIVHGCVKSSNVLIDVNFCPMICDYGLNFLAPWEKRGLVGYVDDEYWNEGGGGGASKESDVYGLGVVMLELLSGRGCEEGLIAKWALPLIKEMSFSELLDARLVIPSDIKPLVRLAKVASACVGNSRMCRPSMAQVTTILNNLEMEVSI | 335 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo6g02002 | 335 | PIRSF | ILK | 31 | 334 | - | - | |
Pumo6g02002 | 335 | SUPERFAMILY | Protein kinase-like (PK-like) | 46 | 326 | IPR011009 | - | |
Pumo6g02002 | 335 | FunFam | serine/threonine-protein kinase-like protein ACR4 | 30 | 141 | - | - | |
Pumo6g02002 | 335 | FunFam | Receptor protein kinase CRINKLY4 | 143 | 333 | - | - | |
Pumo6g02002 | 335 | Gene3D | Transferase(Phosphotransferase) domain 1 | 144 | 334 | - | - | |
Pumo6g02002 | 335 | Pfam | Protein kinase domain | 65 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo6g02002 | 335 | Gene3D | Phosphorylase Kinase; domain 1 | 25 | 141 | - | - | |
Pumo6g02002 | 335 | ProSiteProfiles | Protein kinase domain profile. | 64 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo6g02002 | 335 | PANTHER | OS01G0253100 PROTEIN | 39 | 330 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo6g02002 | Pumo-Chr6 | 33184007 | 33185810 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo6g02002 | 32 | 326 | Receptor kinase-like Gene Family | AT3G59420 | 40.000 | 3.54e-54 | 188 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Pumo6g02002 | Pkinase | 3.7e-25 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo6g02002 | - | - | gmx:100809726 | 606.675 |