Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01850 ATGAGCACTGTCAGCCACCTATTGTGCACCGAAACTTTAGGTCTGCTAATGTACTCCTCAATGACAAATTGGAAGTGCAGTGTCTCTGATTGTGGATTAGGTTCTTTACTATCTTCTGGCTCTCCTAGTCAGTTGTTGGGACGCCACCTCACAGCTAATGGTTACAGTGCTCCAGAACTTGAGTATGGAAGTTATACACTGCAAAGTGATGTCTTTAGCTTTGGAGTCGTAATGCTAGAACTCCTCACTGGACGAAAATCCTATGACAGCTCACTGCCTCGTGGAGAGCAATTCTTGGTGAGATGGGCAGTCCCTCAACTCCATGACATAGATGCATTGTCAAAAATGGTTGACCCCTCCTTGAATGGAGAATATCCTAAGAAATCCTTGTCACGTTTTGCAGACATTATTTCTTCATGTATACAGCATGAACCTGAATTTCGACCAGCAATGTCAGAAATTGTTCAGGATCTCTTGCGAATGATGTAG 489 0.4356 MSTVSHLLCTETLGLLMYSSMTNWKCSVSDCGLGSLLSSGSPSQLLGRHLTANGYSAPELEYGSYTLQSDVFSFGVVMLELLTGRKSYDSSLPRGEQFLVRWAVPQLHDIDALSKMVDPSLNGEYPKKSLSRFADIISSCIQHEPEFRPAMSEIVQDLLRMM 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01850 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01850 162 Pfam Protein tyrosine and serine/threonine kinase 24 158 IPR001245 GO:0004672|GO:0006468
Pumo6g01850 162 SUPERFAMILY Protein kinase-like (PK-like) 23 158 IPR011009 -
Pumo6g01850 162 Gene3D Transferase(Phosphotransferase) domain 1 5 162 - -
Pumo6g01850 162 PANTHER OS01G0253100 PROTEIN 23 159 - -
Pumo6g01850 162 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 16 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01850 Pumo-Chr6 28518735 28521364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01850 28 162 Strubbelig Receptor Gene Family AT4G03390 75.556 7.01e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pumo6g01850 PK_Tyr_Ser-Thr 6.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01850 - - gmx:100794130 240.736