Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01832 ATGCACGGAAGGGCGCGAGAGAAGCGCGGTTTGGATTCGGCTTCTGCCGAAGAAGGACAACCTGATCGGAAACGACCTGCGTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTTGAGCGTGCTTTGGCAAAACTAGCCCCTGCCAAGCTTTCTACTGGCAGGTCTTCCCCAAAGCGAATAGAAGGCCCTGATGGCAAAAATTTACAATTGCACTTCAAGACCAGGCTATCCCTTCCCCTCTTTACCGGTGGGAAAGTGGAGGGCGAGCAAGGGGCAGCCATACATATTGTTTTGATTGATGCAAATACTGGCCATATTGTCACATCAGGGCCAGAGTCATGTGTCAGGCTAGATGTTTTTGTACTAGAGGGAGATTTCAATAACGAGGATGATGAGAATTGGGATGAAGAAGAGTTTGATAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTAACTGGTGATCTGCAAGTCACACTGAAGGAGGGTGTAGGAACACTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTTAGATTGGGGCTGAAAGTTGCCTCAGGTTGTTGTGAGGGAATGCGTATCCGTGAAGCCAAATCAGAACCTTTCACAGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCACCCGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAATAAAGCTGGAATATATACGGTTGAAGACTTCTTAAGACTTGTGGTCAGAGACCCTCAGAGACTGCGGAATATTCTTGGGAGCGGCATGTCGAATAAGATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTTTATGTATACTATCCTGATGATGCAAGAAATGTGGGTGTTGTTTTCAATAATATTTATGAATTAAGCGGCTTAATTGCCAACGACCAATTTTACTCAGCTGATTCTCTCTCTGAGAATCAAAAGGTTTTTGTAGACACGTTGGTGAAGAAGGCATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTGGTAAATGACAATGAGGATAAGACTTTGGATACCACTCATCCTCAGGCTCCAATGATTTCCCATGAATATTCAAACTCACTTCAGCAGATATCCATCCCAGCTTTGCCACTTCCTGTACATGCTGGCCAGCCTTCAATGGATTCAGGAGTAACAGTTGGAGGTTACCATGATGGGACAACTTCCAGATTCTCCTTGCCACCACAGAATCCTAGTCTTAATTCTTCCATTCAGTTTGATGATAACGCATTTCCACTACAAAACCAGTTGATGAGTGTTTCACACCATGCCCAACTTCCAAGAAATGAGACTATTGGTCCTCCACAATCATCCACGCATGGCTTCGAGCCCGTCAGCATTTCAAATCCTGCTTATAGAGGAGTTGAAGAGTACTTCCCAGAGGAGGAAATTCGTATCAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTACTCCGTTTTTTTAACATGGGAGGCCAACCTCATCCTTCCTTTAATACCCACGAAGATGGGTATCCTAGTTCATCTTCATACCTTTCTGCAAACCCCATGGGCTACAATTTTGATGATGAACCAAACCGTTCCTCAGGAAAAGCTGTTGTGGGCTGGCTCAAGCTGAAGGCAGCCTTAAGATGGGGTATTTTTATTCGGAAGCAGGCTGCTGAGAGACGGGCACAACTCGTCGAATTGGATGACCCGTAG 1866 0.4475 MHGRAREKRGLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLAPAKLSTGRSSPKRIEGPDGKNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLIDANTGHIVTSGPESCVRLDVFVLEGDFNNEDDENWDEEEFDSHIVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEGMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLIANDQFYSADSLSENQKVFVDTLVKKAYDNWMHVIEYDGKSLVNDNEDKTLDTTHPQAPMISHEYSNSLQQISIPALPLPVHAGQPSMDSGVTVGGYHDGTTSRFSLPPQNPSLNSSIQFDDNAFPLQNQLMSVSHHAQLPRNETIGPPQSSTHGFEPVSISNPAYRGVEEYFPEEEIRIRSHEMLENEDMQHLLRFFNMGGQPHPSFNTHEDGYPSSSSYLSANPMGYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLVELDDP 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01832 621 Pfam Calmodulin binding protein central domain 249 315 IPR046830 -
Pumo6g01832 621 MobiDBLite consensus disorder prediction 1 25 - -
Pumo6g01832 621 PANTHER OS02G0177800 PROTEIN 6 536 IPR012416 GO:0005516
Pumo6g01832 621 MobiDBLite consensus disorder prediction 1 24 - -
Pumo6g01832 621 Pfam Calmodulin binding protein C-terminal domain 320 382 IPR046829 -
Pumo6g01832 621 Pfam Calmodulin binding protein-like N-terminal domain 90 237 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01832 Pumo-Chr6 28295072 28300995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01832 6 616 Calmodulin-binding Proteins AT5G57580 62.171 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01832 - - gmx:100812605 1170.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01832 6 28295072 28300995 Pumo2g00908 2 13725475 13729738 PCT