Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01815 ATGATAGTGAGAAACCCCAACAACAACATCATAGTGTACTATAGAAGGATCACAACAATAGCTTGGTACAAAGATAATGATTTTGTTTCGGTGAGCTTGGCACCCTTTGAACAAGGCCATAAGAATACCACCTTTCTTCAAGCAGTGTTTGAAGGGAAGAATGTGATTATGCTCAAACCTCACTAA 186 0.3871 MIVRNPNNNIIVYYRRITTIAWYKDNDFVSVSLAPFEQGHKNTTFLQAVFEGKNVIMLKPH 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01815 61 Pfam Late embryogenesis abundant protein 3 47 IPR004864 -
Pumo6g01815 61 PANTHER OS05G0367900 PROTEIN 3 52 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01815 Pumo-Chr6 28134828 28135013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01815 3 59 SNARE and Associated Proteins AT1G32270 33.333 1.22e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01815 - - gmx:100783747 101.679