Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01811 ATGGGTGGTGGAGAAGCATTCGCCGGAGCTTCGGGTCTCCGGCGAACGGTGGAGCTAATTTTTTCTATTCTCACTCTCTCGCATTCGATTCGCGTCTTCGCCGGAAAATGGCAACTGATACGGACCAAGCTGGAGGAGCTTCACGGCGGATTAATCGCCGCCGAGAGCTGCGACTCCGGCGAGAGTCCGGCGCTGTCGCGGCTGGTGGCGGCGGTGGCGGCCACCGCGACGGAGTGCCACGATCTGTGTCGGCGCTGCGTGGATGTCTCTTACAGTGGGAAGCTTCTGATGCAGAGCGATTTGGACGTGGCGTTCGCGAAGCTCGACGCGCACGCGAAGAGGCTCTCGGAGATATACAAGACGGGAATTTTTTCAAATGGGTTCGCGCTGGTGGTGTCAAAACCGAGTCTTGGCGCTTCGAGAGAGGACATGAGGTTCTACGTGAGGGACTTGACGACGAGGATGAAGGTTGGGGATTTGGGTATGAAACGACAAGCGTTGAGGAACCTTCTAGAAGTTGTATTAGAGGATGAGAAGTATGTGAAGGTGATTGTTGATGCGGGTGACGTGGTTCATTTGTTGGTGGGGTTTTTGGGGTCTAGTGAGGTGGAGATTCAGGAGGAGAGTGCTAAGGTTGTTTCTGTGGTTGCGGGGTTCGATTCTTACAAAGGGGTTTTGGTTGGTGCCGGGGTGATTGCTCCTTTGGTTAAGGTTTTGGATTGTGGGAGTAGTTTGGGGAAGGTTGCGGCTGCCAGGTGTTTGGTGAAGTTGACTGAGAATTCGGACAATGCTTGGTGTGTTTCGGCTCATGGGGGGGTTAGTGTGTTGTTGAAGATTTGTGGTGGTGGTGGTGGTGGTGATTTGGTTGGGCCTGCTTGTGGGGTGTTGAGGAATCTCGTTGGTGTTGAGGAGATTAAGAGGTTTATGGTTGATGAGGGTGCTGTGTTAACATTCATTAGGCTTGTGAGGTCCAAGGAGGAAGCAATTCAGGTGAATTCAATAGGGTTTATTCTGAGTATTGCTTCCGGGGATGAGGTTGTTAGGCAGATGGTGATCAGAGAGGGAGGGATCCGTGCTTTGTTGCGTGTTTTGGATCCTAAGTGGTCTTATTCTTGTAAAACAAGAGTGGTAGCAATGAGGGCTGTTGAGGATTTGTGTTTTTGTTCACCTAGCTCTGTGGGGGTGTTGATGAGTTATGGCTTTGTGGATCAATTGATATATTATGTTCGAAATGGCGAGGTTTCGATTCAGGAGCTGGCGTTGAAGGTGGCGTTTAGGTTGTGTGGAACATCGGAGGAGGCCAGGAAAGCATTGGGGGATGCCGGGATTATGCCGGAGTTCGTTAAGTTTCTCAATGCAAAGTCATTCGAGGTTCGCGAAATGGCAGCTGAGGCGCTCTCTGCCATGGTTATGGTGCCTAGAAATAGAAAGAGGTTTGTGCAGGATGACCATAACATAGCCCTTCTTCTGCAGTTGCTTGATCCAGAGGAGGGGAATTCAGGTAACAAAAAGTTCTTGATCTCTATATTGTTGTCCTTAACGAGTTGCACTAGTGGGAGGAAAAAGATTGTTAGTTCTGGATATGCCAAAAACATAGAAAAACTTGCGGAGGCTGAAGTTTCTTCTGATGCCAAGAGACTTGTCAAGAAGCTATCCACAAACCGGTTTCGCAGTATGTTGAGTGGAATCTGGCACTCGTGA 1701 0.5003 MGGGEAFAGASGLRRTVELIFSILTLSHSIRVFAGKWQLIRTKLEELHGGLIAAESCDSGESPALSRLVAAVAATATECHDLCRRCVDVSYSGKLLMQSDLDVAFAKLDAHAKRLSEIYKTGIFSNGFALVVSKPSLGASREDMRFYVRDLTTRMKVGDLGMKRQALRNLLEVVLEDEKYVKVIVDAGDVVHLLVGFLGSSEVEIQEESAKVVSVVAGFDSYKGVLVGAGVIAPLVKVLDCGSSLGKVAAARCLVKLTENSDNAWCVSAHGGVSVLLKICGGGGGGDLVGPACGVLRNLVGVEEIKRFMVDEGAVLTFIRLVRSKEEAIQVNSIGFILSIASGDEVVRQMVIREGGIRALLRVLDPKWSYSCKTRVVAMRAVEDLCFCSPSSVGVLMSYGFVDQLIYYVRNGEVSIQELALKVAFRLCGTSEEARKALGDAGIMPEFVKFLNAKSFEVREMAAEALSAMVMVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILLSLTSCTSGRKKIVSSGYAKNIEKLAEAEVSSDAKRLVKKLSTNRFRSMLSGIWHS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01811 566 Pfam Armadillo/beta-catenin-like repeat 432 467 IPR000225 GO:0005515
Pumo6g01811 566 Gene3D - 147 555 IPR011989 -
Pumo6g01811 566 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 565 - -
Pumo6g01811 566 SUPERFAMILY ARM repeat 154 543 IPR016024 -
Pumo6g01811 566 SMART arm_5 177 218 IPR000225 GO:0005515
Pumo6g01811 566 SMART arm_5 219 259 IPR000225 GO:0005515
Pumo6g01811 566 SMART arm_5 302 342 IPR000225 GO:0005515
Pumo6g01811 566 SMART arm_5 431 471 IPR000225 GO:0005515
Pumo6g01811 566 SMART arm_5 343 387 IPR000225 GO:0005515
Pumo6g01811 566 SMART arm_5 260 301 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01811 Pumo-Chr6 28063342 28065892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01811 131 365 U-box Gene Family AT2G23140 28.689 1.20e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01811 - - gmx:100809382 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01811 6 28063342 28065892 Pumo2g00915 2 13801188 13803342 PCT