Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01805 ATGACGTCACACTCCCACTACCCACCGGACTTAGACGCCGACTCCGTCACCTCCTCGCCACGCTCCGATCACTTCCACGACGCACCGCCGCGCGTCCGCTTCATGTGCAGCTTCGGCGGCAAGATTCTCCCCCGCCCCCACGACAACCAGCTCCGCTACGTCGGCGGCGACACCCGAATCGTCGCCGTCCACCGCTCCATCACTTTCTCCGCCCTCATTCTCAAACTCTCCAAACTCTCAGGCATGAGTAACATAACCGCGAAGTACCAGCTCCCGAACGAGGATCTGGACGCGTTGATCTCGGTCACCACGGACGAGGACGTGGAGAACATGATGGACGAGTTCGACCGCGTCGCACACAACCAGAACCCGCGGTCGGCGCGGCTTCGGCTGTTTCTCTTCCCCGAAGGGGAAGACTCCCGCGCCAGCAGCATCAGCTCGCTCCTGAACGGCTCGGCCAACCGCGAGAACTGGTTCCTTGACGCGCTAAACGGCGGCGTTTCGGGGCTCGAGCGAGGCCGCTCCGAAGCCTCCTCCATGGTCTCGGAAGTACCCGATTACCTCTTCGGGTTAGACAACTCCGAAGAAACAAACCACCAACAACACCATCGCGACCCGCGACCCAAACCCGGACCCGCTCGCCAAGACAGCGTTTCCGTTTCGGATCCGGGTTCGCCCGCCCCGGTTGTCTCGTCCCCTTATTGCTCCACGTCATCAGCACCCTCACCCTGCGTGCCCTCTCTCCCGAACCTGCCCCCGGTTAAAACAAAACCGTTAAACCCGGTTCCTGACACGGGCTCTAAGGAAAATCAAACCGAACCTGGATCGGATCCTCAACCGATCCTGAACCAAAACCCGAACCTGTATCCAAATAACCCTGTTGTTCACTATCCTCCAGAAGCTGCTTATTCCGCTCATTCAGTAAACCCGCCGGTTCCTGTTTTTTATGTTTCCGGTCCGGTTCGACCGGGGACTGTTCAGGTTCCTATGCAAACCCCTTACCCCTACGTTCAACAACCGTATCATGCTGTAGTGCCACCTCAGGTTCCAATCGGGTACCATCATTTGGCTCCGGGTTCGGGTCAAGTATATGGAGCAGGCATGCGGCACGTGACCCCACTGCAACCTTACAGCCCCTCCACCGCTGTGGTTCACGACGGTTTGAAACAGCACATGTATCATGCCGTGCCGAATTCCGGTCCAGTACCGGTTCATCCAGTGATGCCCATGACCGGTTCGGATGAACTGCAGAGAGTTGGAGCAGAGTTTGTGGCGGGTCGGGGCCCCAACTCGCTAAATAACTGA 1305 0.5854 MTSHSHYPPDLDADSVTSSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVHRSITFSALILKLSKLSGMSNITAKYQLPNEDLDALISVTTDEDVENMMDEFDRVAHNQNPRSARLRLFLFPEGEDSRASSISSLLNGSANRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEETNHQQHHRDPRPKPGPARQDSVSVSDPGSPAPVVSSPYCSTSSAPSPCVPSLPNLPPVKTKPLNPVPDTGSKENQTEPGSDPQPILNQNPNLYPNNPVVHYPPEAAYSAHSVNPPVPVFYVSGPVRPGTVQVPMQTPYPYVQQPYHAVVPPQVPIGYHHLAPGSGQVYGAGMRHVTPLQPYSPSTAVVHDGLKQHMYHAVPNSGPVPVHPVMPMTGSDELQRVGAEFVAGRGPNSLNN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01805 434 MobiDBLite consensus disorder prediction 218 244 - -
Pumo6g01805 434 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Pumo6g01805 434 SUPERFAMILY CAD & PB1 domains 47 143 - -
Pumo6g01805 434 MobiDBLite consensus disorder prediction 196 211 - -
Pumo6g01805 434 CDD PB1_UP2 35 134 - -
Pumo6g01805 434 PANTHER OS05G0427100 PROTEIN-RELATED 13 361 - -
Pumo6g01805 434 MobiDBLite consensus disorder prediction 245 259 - -
Pumo6g01805 434 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 51 136 - -
Pumo6g01805 434 SMART PB1_new 46 136 IPR000270 GO:0005515
Pumo6g01805 434 MobiDBLite consensus disorder prediction 1 26 - -
Pumo6g01805 434 MobiDBLite consensus disorder prediction 263 291 - -
Pumo6g01805 434 MobiDBLite consensus disorder prediction 196 291 - -
Pumo6g01805 434 Gene3D - 52 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01805 Pumo-Chr6 27900071 27901742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01805 21 171 MAP Kinase Kinase Kinase AT3G46920 40.789 7.53e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01805 - - gmx:100806717 729.554