Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01773 ATGGATACAGGTGAGACAGTTGCAGTTAAAGTCCTTGGTACTAATTCAAGACAAGGAGAACAGGAATTTTTAACTGAGGTTTTATTACTTGGGAGATTACATCACAAAAACCTTGTGGATTTGGTGGGATATGTGGCAGAAAGAGGAAAGCATATGCTTCTTTACATTTACATGAGCAATGGCAGTCTTGCTTCCCATTTGTATGCTGATTTGGGAAAAAATCATGAGCCATTGAGCTGGGATTTGAGGCTTAGCATAGCCCTAGATGTTGCAAGGGGACTGGAATATCTACATCATGGGGCTTCTCCACCTGTTGTGCACCGTGACATCAAATCTTGCAACATTCTGTTGGACCAGTCTATGATAGCCAAGGTCACTGACTTTGGGCTTTCCAGACCAGAGCTGATCAAACCTCGCACATCAAATGTCAGAGGAACTTTCGGATATGTTGATCCTGAGTATTTGTCTACAAGAACCTTCACTAAGAAAAGTGATGTTTATAGTTTTGGTGTGCTACTGTTTGAGCTTATCACTGGCAGGAATCCACAGCAAGGGCTCATGGAATATGTAAAACTAGCAGCCATGGAAGGTGAGGGTAAGGTTGGATGGGAAGAAATTGTAGACTCACAATTAAATGGAAAATATGATGTGCATAATCTTCATGACATGGCTTCAATTGCATTCAAATGTGTTAATGAAGTCTCCAAAAGCCGACTTTCGATGTGCGAAATTGTTCAAGAATTATCTCAGCTTTGTAAGAGACATAGTAAAAATCATGGTCAAACATCTCCTGCTGCATCAAAGGAAGTGTCCATTGAAGTGGACAAGCTTGATACTCGTGACTTTTCATCAATTGAGAGTTCACAGATGCTGCGCAGATTGCATAGCCGATGA 894 0.4116 MDTGETVAVKVLGTNSRQGEQEFLTEVLLLGRLHHKNLVDLVGYVAERGKHMLLYIYMSNGSLASHLYADLGKNHEPLSWDLRLSIALDVARGLEYLHHGASPPVVHRDIKSCNILLDQSMIAKVTDFGLSRPELIKPRTSNVRGTFGYVDPEYLSTRTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLAAMEGEGKVGWEEIVDSQLNGKYDVHNLHDMASIAFKCVNEVSKSRLSMCEIVQELSQLCKRHSKNHGQTSPAASKEVSIEVDKLDTRDFSSIESSQMLRRLHSR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01773 297 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01773 297 Gene3D Transferase(Phosphotransferase) domain 1 59 276 - -
Pumo6g01773 297 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Pumo6g01773 297 FunFam calcium/calmodulin-regulated receptor-like kinase 1 58 269 - -
Pumo6g01773 297 Pfam Protein tyrosine and serine/threonine kinase 4 248 IPR001245 GO:0004672|GO:0006468
Pumo6g01773 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Pumo6g01773 297 PANTHER OS01G0750732 PROTEIN 2 264 - -
Pumo6g01773 297 SMART serkin_6 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g01773 297 SUPERFAMILY Protein kinase-like (PK-like) 2 253 IPR011009 -
Pumo6g01773 297 PIRSF ILK 2 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01773 Pumo-Chr6 27104059 27107108 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01773 3 273 Glycoside Hydrolase AT3G07070 42.308 5.52e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pumo6g01773 PK_Tyr_Ser-Thr 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01773 - - gmx:100816549 547.354