Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01766 ATGTCCAAGAAAAGGAAAAGCTTCAGTCTGAGCTGGAGGCTGCTGAGAAGAAGTGCACTGACACTGAGACTGAGACTGAAGAATAAGATTGGGGAGTTGGAAGAGACTGTATCTGATTTGAGGAAGACAATTTCTTCTCTAGAAGAGAGAATTGTGAAGGAAGAATCAGATAAATTGGAAGCAATTCATTCTTATGGTAAAGAAAAGGAAGCCAGAACTGAAGCTGAGAAAGTTCGGGATGAGAAATCAGCTGAGCTTGAGAAAGTTCGGGATGAGAAAGCAGTTGCTGTGAAGAAGGCCATTTCAAATGAGGACTTGTACAAGCGATCACAAGAGTATAACATGAGCCTGCAGCAGTACAATAGTCGTATTCAGTCAGATCTCGAAACAGCTAATGAGGCCCATAAACGGCTTGAAACAGAGAAAGCAACCATTGTGGAGAGCCTTAGCAATGTAAGAGGCCACAATAAGGCATTGCAGGATCAGTTGGTATCTCTTAAAGTTTCACAAGACGAGGCTATAAAGCAGAAAGAAATTTTAGCAAATGAGCTCAAATGCCTTCGTGAAGAGTTAAAACAAATTAGAGATGATCGTGATCGCCAATTGGGTCAAGTACATGCTTTAACTGGAGAAATAGCAAAGTACAAAGAATATACAGGGAAAACATGTGCACAATTGGATACGTTGATGATTAAAACAAATGCTCTTGAGGAGACTTGTTCATCTCAAAATGAGCAAATACTTATACTGCAGCAGCAGTTGTTTGCTGAAAAGGAAAAGTTAAAGAATGTTGATTTGTCTGCTTCAGAAACAAGGACAATGTTTGAAGAGCAAAAGAGAATTATATGTGAGCTACAGGATCGATTGGCGGATAAAGAATTTCAAGTAATTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTATCCTGGAGCTAAAAGGAAATATTCGCGTGTTCTGCCGTGTGCGGCCGCTCCTACCAGAGGACAGTACAGGAACGGACATGGTTGTTTCTTTCCCTACGTCAACAGAAGCGCTTGGTCAGGGCATTGAATTGGTACAAAGCGGGCAGAAGTACAATTTCACATTTGACAAGGTGTTTAATCACGAGGCTTCTCAGCAGGACGTTTTCATAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTGTGCATCTTTGCATATGGACAGACGGGTTCAGGCAAAACCTATACTATGATGGGTAGGCCTGATGCGCTAGATCTGAAAGGATTGATACCACGTTCTTTAGAACAGATATTCCAGACTAGCCAGTCTCTAAAAGACCAAGGGTGGAAGTACAAAATGCATGTATCAATACTGGAAATATATAATGAGACCATCAGGGATTTGTTATCATCAAATCGGTCAAGTGGGAATGATCATACACGAATAGAAAATAGTGCTCCCACTCCCAGCAAGCAGTACACTATTAAACATGATGCAAATGGAAACACACATGTTTCGGACCTCACCATTGAGGAAGTTTGTAGCGCGGATGAGATTTCCTCCCTCCTACGACAGGCTGCACAAAGCAGGTCAGTGGGAAGAACACAGATGAATGAACAGTCATCCAGAAGCCACTTTGTCTTTACATTGCGTATAAGTGGGAGAAATGAGAAAACAGAGCAACAAGTGCAAGGTGTCTTAAACCTGATTGATCTGGCTGGAAGTGAAAGATTGTCAAGGAGTGGGGCAACTGGGGACCGGTTAAAGGAAACTCAGGCTATCAACAAAAGTCTCTCAGTCTTTGAGCGACGTCATATTTGCTTTGGCAAAGAAAGAGGAGCATGTTCCTTTTAG 1833 0.4195 MSKKRKSFSLSWRLLRRSALTLRLRLKNKIGELEETVSDLRKTISSLEERIVKEESDKLEAIHSYGKEKEARTEAEKVRDEKSAELEKVRDEKAVAVKKAISNEDLYKRSQEYNMSLQQYNSRIQSDLETANEAHKRLETEKATIVESLSNVRGHNKALQDQLVSLKVSQDEAIKQKEILANELKCLREELKQIRDDRDRQLGQVHALTGEIAKYKEYTGKTCAQLDTLMIKTNALEETCSSQNEQILILQQQLFAEKEKLKNVDLSASETRTMFEEQKRIICELQDRLADKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDSTGTDMVVSFPTSTEALGQGIELVQSGQKYNFTFDKVFNHEASQQDVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDALDLKGLIPRSLEQIFQTSQSLKDQGWKYKMHVSILEIYNETIRDLLSSNRSSGNDHTRIENSAPTPSKQYTIKHDANGNTHVSDLTIEEVCSADEISSLLRQAAQSRSVGRTQMNEQSSRSHFVFTLRISGRNEKTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSVFERRHICFGKERGACSF 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01766 610 Gene3D Kinesin motor domain 257 598 IPR036961 -
Pumo6g01766 610 Coils Coil 121 141 - -
Pumo6g01766 610 ProSitePatterns Kinesin motor domain signature. 558 569 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo6g01766 610 PRINTS Kinesin heavy chain signature 559 577 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g01766 610 PRINTS Kinesin heavy chain signature 391 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g01766 610 PRINTS Kinesin heavy chain signature 528 545 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g01766 610 ProSiteProfiles Kinesin motor domain profile. 316 610 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g01766 610 Coils Coil 72 99 - -
Pumo6g01766 610 Coils Coil 23 57 - -
Pumo6g01766 610 Coils Coil 170 204 - -
Pumo6g01766 610 MobiDBLite consensus disorder prediction 465 491 - -
Pumo6g01766 610 PANTHER KINESIN-LIKE PROTEIN KLP-3 52 593 IPR027640 GO:0003777|GO:0007018
Pumo6g01766 610 Pfam Kinesin motor domain 322 594 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g01766 610 SMART kinesin_4 314 607 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g01766 610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 276 594 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01766 Pumo-Chr6 26993642 27000699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01766 225 594 Calmodulin-binding Proteins AT5G65930 34.026 3.26e-54 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01766 K10405 - gmx:100780319 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01766 6 26993642 27000699 Pumo6g01766 6 26993642 27000699 ECH